Protein Info for CA264_12095 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 522 PF05833: NFACT_N" amino acids 183 to 400 (218 residues), 64.7 bits, see alignment E=1.1e-21 PF05670: NFACT-R_1" amino acids 406 to 503 (98 residues), 65.9 bits, see alignment E=7e-22 PF18297: NFACT-R_2" amino acids 409 to 489 (81 residues), 31 bits, see alignment E=3.5e-11

Best Hits

Predicted SEED Role

"Fibronectin/fibrinogen-binding protein" in subsystem Adhesion of Campylobacter

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YTG2 at UniProt or InterPro

Protein Sequence (522 amino acids)

>CA264_12095 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MHLNYYFLRQLTQALRAKVLGMQAITAFSQNKDELILGFARQGEELYIRAQLGAQFTSLS
FPAEFRRARANSVELMQAMQGQTVEDVVQHRNERSFYFQLSGGYLLLFKLFGNRSNIILY
QGQEAVELFQHKFAADAALNPLQMDRPLQQNAEAFANANGNLRKVYPTFGDVPALYLEER
GYQEASLEEKWELVQDTLDVLQAPEAYYIIRLNGKLRLSLLPVGEVLHTYSGPMEAADHY
TRHYLSETGFEQQYGQASQVLERKRQVTQTVMEQSEQKLQELRHDRSYSQTADVIMANLT
NIPPRATEVELYDFYTDQNRTYKLKQNETPQKFAERLYRKAKNQHVEVKQLEEKVERKLE
ELIVLEDALQALREVENYKQLKAYLREYNHLLGSKQQEQQQVPFRVFESEGFKILVGKSA
QNNDQLTQRHTYKEDIWLHAKDVSGSHVVIKHQAGKTIPVTVLEKAAQLAAYYSKRKADS
LCPVIYTPKKWVRKPKGSPAGSVVVEREKVLLVKPENPFAKV