Protein Info for CA264_11935 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 PF01557: FAA_hydrolase" amino acids 2 to 191 (190 residues), 170 bits, see alignment E=3.1e-54

Best Hits

Swiss-Prot: 44% identical to FAHD1_MOUSE: Acylpyruvase FAHD1, mitochondrial (Fahd1) from Mus musculus

KEGG orthology group: None (inferred from 68% identity to mtt:Ftrac_0978)

Predicted SEED Role

"Fumarylacetoacetate hydrolase family protein" in subsystem Gentisare degradation or Salicylate and gentisate catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YY54 at UniProt or InterPro

Protein Sequence (203 amino acids)

>CA264_11935 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKILAIGRNYAEHIAELKNEVPDEPVIFFKPDTAVLRNNEPFYYPEYSNDVHYEVELLLR
IGREGKNIEKKFAHKYYDAIGLGIDFTARDLQAKAKAKGLPWTLAKGFNGSAPVSEFLPL
ADFPDLQNIGFRLEVNGETKQRGNSGMMLYDFDDIIAYISKFITLKKGDIIYTGTPEGVG
PVKIGDRLEGYVEDKKLLNFEVK