Protein Info for CA264_11840 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: membrane-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07661: MORN_2" amino acids 76 to 93 (18 residues), 13.2 bits, see alignment (E = 4.5e-06) amino acids 97 to 118 (22 residues), 14.2 bits, see alignment (E = 2.1e-06) amino acids 146 to 165 (20 residues), 26.1 bits, see alignment (E = 2.8e-10) amino acids 169 to 190 (22 residues), 18.5 bits, see alignment (E = 8.5e-08) amino acids 193 to 210 (18 residues), 13.9 bits, see alignment (E = 2.6e-06) amino acids 217 to 236 (20 residues), 15.8 bits, see alignment (E = 6.3e-07) amino acids 241 to 262 (22 residues), 21.3 bits, see alignment (E = 1.1e-08) amino acids 266 to 283 (18 residues), 13.2 bits, see alignment (E = 4.4e-06) amino acids 339 to 359 (21 residues), 17.4 bits, see alignment (E = 2e-07) amino acids 365 to 384 (20 residues), 19.3 bits, see alignment (E = 4.8e-08) amino acids 389 to 408 (20 residues), 11.5 bits, see alignment (E = 1.6e-05)

Best Hits

KEGG orthology group: None (inferred from 33% identity to mtt:Ftrac_1201)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YT82 at UniProt or InterPro

Protein Sequence (441 amino acids)

>CA264_11840 membrane-binding protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MLKLLSFLPAALLISSFALGQAQQPVVTYHDDTFTQVKEKYFITSDSAIVGYYHRYYPTG
EPEALVKFVEGKKDSVYTEFYPSGQPKLQLTYNQGVKQGPFKAFRPDGKLLQEGYYENDQ
QSKLFKTFFDDGTLKKETAFVDGFPEGLVREYYPSGKLKSEITYKRSKQNGPAKTFYANG
SLETEASYNNGMLEGSYKTYFDNGQVQTEVQNVAGEKHGSYKSYYRSGKLSTEGSFLAGK
MHGPAKSYYESGKTRSVINYKNGEVNGTAQVFYEDGTLKEEVSASNNGADSKTARYYPSG
NLEAEEQLKDKKKHGTWKVYYDAPGKKLKHSENYAADKLTGEHLSYYDNGQVEERETYEK
GKVVGTAYTYYPSGKLKSETNHKDGLRFGPYKAYFEDGKVEVLGQFRNNRETGTWKYHSP
AGKVMKTRLYRNGQVIEENEK