Protein Info for CA264_11205 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 313 PF19459: DUF5996" amino acids 14 to 306 (293 residues), 402 bits, see alignment E=7.3e-125

Best Hits

KEGG orthology group: None (inferred from 54% identity to tra:Trad_1823)

Predicted SEED Role

"Ava_C0101 and related proteins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YSX3 at UniProt or InterPro

Protein Sequence (313 amino acids)

>CA264_11205 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MDATNIPGKEGYVFPPLPLEEWEHTKETLHLYLQIIGKIRLQLMPRRNHWWNVTLYVTSR
GLGTGPIPYKFYTFEVDLDFIEHQLHIRTSTGASETIALQDGLSVAAFYAQAMKALEVLG
IHLEILARPYDNISTTPFAQDHLHATYHPEQVNRYWRVLVLVDQVLKEFSGRFYGKSCPV
HLYWHHLDLTLTRFSGKRVPTQPEASTVEKDAYSHEVISFGFWPGDKEVRFPAFYSYTFP
SPEGLEKEPLQPAQAAWVEANGSPMAVLNYEELRTLDNPRQALLAFLESCYQAGAKLAGW
PLEELQVKPLEQL