Protein Info for CA264_11160 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: glycoside hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 807 PF03065: Glyco_hydro_57" amino acids 39 to 307 (269 residues), 77.2 bits, see alignment E=1.4e-25 PF12055: DUF3536" amino acids 340 to 623 (284 residues), 372.3 bits, see alignment E=1.7e-115

Best Hits

KEGG orthology group: None (inferred from 50% identity to dku:Desku_2853)

Predicted SEED Role

"Alpha-amylase/alpha-mannosidase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YST4 at UniProt or InterPro

Protein Sequence (807 amino acids)

>CA264_11160 glycoside hydrolase (Pontibacter actiniarum KMM 6156, DSM 19842)
MNKYVCIHGHFYQPPRENPWLNEVELQESASPYHDWNERISEECYARNSASRILNAKGNI
VDIINNYGYISFNFGPTLLEWMQRKDPDTYKAILEADKESQKRFSGHGSAIAQVYNHIIM
PLANERDKQTQVIWGIYDFTKRFGRAPEGMWLAETAADTPTLEVLAEHGIKFTILSPYQA
RSFRKIGDKEWTSAEGARINPRRPYLCQLPSGRQIVLFFYDGPVSQGIAFERLLNRGEDF
AHRLVSVFDEHSKEPQVMNIATDGETYGHHHRFGEMALSYAINHLEEENLAQITVYGEFI
EKFPPQYEARIIEESSWSCAHGVERWRSDCGCNTGGHPNWNQAWRTPIRNAFDWLRDELA
PLYEAEMQQLGADPWQTRNDYIQVVMDRSEENVERFISDHTSRELSMPEKVRFLKLMEME
YHTLLIYTSCGWFFDEVSGIETVQDIFYASRALQLAHDIGGKDLEPAFLKLLSAAKSNLR
ERGDASMIYEQSVKPTMIDLLRVGAHYAVSSMFQDFSEELDLYSFTAVSEEYDCTQAGRQ
RLAVGRAIIKSKVTWEQLTVTYGVLHLGDHQLFGGVREFMSYEDYEQLREELKTAFERGY
VSEVIMLLDKHFESHSYSFWHLFKDDQKKILDQVLGHTMEGVENDFQQLYDNNYSLIAAI
KTIGMEMPRPLQTTVDYVVNTRLLREFEAEEPDPQEVRRLLEEVNRMKVKLSLDQLEFAL
TQRVDQMMRRIQEHPQDTATMDRLVKLLNVIDGSQLETDFWQAQNIAFRMQQDGYADMKK
RSTQGDQAATAWCQKFEKLYQNLNLNI