Protein Info for CA264_10725 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: T9SS C-terminal target domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1096 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF00082: Peptidase_S8" amino acids 173 to 427 (255 residues), 144.3 bits, see alignment E=1.2e-45 PF19081: Ig_7" amino acids 857 to 932 (76 residues), 27.9 bits, see alignment 5.8e-10 PF00801: PKD" amino acids 944 to 997 (54 residues), 43.9 bits, see alignment 4.5e-15 PF18911: PKD_4" amino acids 954 to 1011 (58 residues), 54.1 bits, see alignment 3.2e-18 PF18962: Por_Secre_tail" amino acids 1018 to 1092 (75 residues), 30.5 bits, see alignment 9.3e-11 TIGR04183: Por secretion system C-terminal sorting domain" amino acids 1018 to 1093 (76 residues), 30.6 bits, see alignment 1.3e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YSP9 at UniProt or InterPro

Protein Sequence (1096 amino acids)

>CA264_10725 T9SS C-terminal target domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MPTLSLLLKRCLCTAFLCLLYVTLSQAQGPEAGFGHQTVPNRVVYKLKPQQPVLARSAQS
NSMAQALQRIGAKQVRQKFPEVAATQALANARKAGPAVDLTLIHELEYGAGYTFEQVRTA
LLSTGQVAYVERLYIREPLSQPNDPAADSTKTTQYYLKQVQAYAGWEVEQGDTSVVIGVL
DTGFRLSHQDLNTKVKHNYADPIDGIDNDGDGYIDNYSGWDFADKDNNVYDDTPWKGHGT
AVAGVAAAATNNATGMAGVGYRSLFMPIKVFSSSPNGPFAGYEAIVYAANKGCKVINLSW
GGTGFSEFEQDVINYAVLEKDVLLVASAGNRNTFEDIYPASYDNVLSVGGADKQDVKYKD
HTYSYKLDMISPSSGIYSTSLSGDNRYSSFGGTSYASPTVAGGAALVRSRFPELSARQVA
ERLRATTDHIYGLEGNQPYLEMLGTGRFNLKKALKVQVPTSVRCVAFAPQPKQSLGAGRS
IAIDASFINFLSPTSQLEVTLTSLSPYVSITQGSASLGSMVTMGSASTGARPFVIKIAAD
APGNQKVYLRLGYSDGTYQDFQHFELFINPSFVTLTANNLHLTLNSEGNIGYNGLNMKQG
VGMTYKDGASLLFEGGLLLATNAGVVADNIHNSSWENDRNFTPLSLTSLQFDTPLADQEV
RTAMRTNVEGHPLVEVKTAGFAWSGAPNQDFVILEYQVTNRSSETINRLHAGLFADWDIG
NYTANMAAWDEELQLGYAYSTTQTLPYAGIKLLTTENQVIYHAIDNVGGNDSTVSVDDGF
SNEEKYKIIANGKSRLRAGGSAGNSISHVVGATTLDLAPGQTKTVAFAVLAGDNLEALKQ
HAQAAQQKYTRIKTGPAPVAAAYETCLAEPVVLAPENGSYFNFYSDAEASNLLHAGKTYT
VPTTAPSTTVYVANADSLFLSAAVPMEVTVLPNATAKFRGLPPYIQAGRDFRVKDLSDHA
TIWMWDFGDGTTSSSQEPTHTYKAPGKYTIELTVMNRLTCTSSSYSQAVTVFDTKLRLYP
NPIKDVLAITLTSPLDPDAAPVLQLTDLSGKTITAMPSATDEANVYYNLGSLKAGFYIAR
LTYQGETYVERVLLRK