Protein Info for CA264_09830 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1057 PF04738: Lant_dehydr_N" amino acids 43 to 687 (645 residues), 513.9 bits, see alignment E=5.6e-158 TIGR03891: thiopeptide-type bacteriocin biosynthesis domain" amino acids 760 to 1037 (278 residues), 199.5 bits, see alignment E=4.9e-63 PF14028: Lant_dehydr_C" amino acids 760 to 1037 (278 residues), 220.6 bits, see alignment E=4.1e-69

Best Hits

Predicted SEED Role

"Lanthionine biosynthesis protein LanB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YS51 at UniProt or InterPro

Protein Sequence (1057 amino acids)

>CA264_09830 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKLFNDIDYYLLRTSALPIEDSFDLIENSHAHVCHDFVHKISNPFIKKAFFLASPDFTYA
LDKHLQDGKPLAADEKIVKSLYKYYIRMSSRCTPFGLFAGCALGTFSASTDITFGSDKFR
SVSRLDMYYVSALSEYINRLPHIKEQLLFFPNETIYQVGENFRYIEFSTLKFTRKYMLSS
FKGSRVIRNVLQLAGAGVSRCALIESLKAAGFDQEESTEFIEQLIESQILVSDLLPSITG
EDYFSVLIKRLKLLNGTDALVAELEAVNATVKLSDWTKEAALKVKGILGRHVPVGTKDLV
QTDLFFQTKQNTISRGVIEEVSSLVEAWVSLQEPGKSSALTQFSRKFEAKYGEQEVPLLV
ALDTENGIGYQMTDPEGASYMPLLDNIHVPQSKRAPGMTWGEEKINALQAILDAMQNQSR
EVDLKQSQACREKGRRKPNLPDSMFLFGSFLSSSSEDLDKGNFQFLLNGISGPSGANLLA
RFCHGDEQLQAKVKATLQKEESLHPEVIYAEIVHLPDGRTGNVIMRPTVRSYEIPILTKS
SVEDEFTIRLQDLAVSIQRGTVVLRSKKLNRRVIPRLTNAHNYARGLPVYRFLCDLQNQG
LESLSSWNWSVFKKQPFLPRVKYGKIILSRATWNLKRTDFLKEKSDAFRAYFNRLQSKYN
IPDKVVLVEGDNELLLSMTCELSLNILADKLKKKDVVIQEFLFTPDNCFIKDNRGSYTNE
LVIPFCTKERKLPQVSSIPSAHTQPLDKAVKRDFQVGESWLYFKIFTGNKTADRILVEAI
KPLAESLLLDGVIEKWFFLRYDEHGHHLRVRFYHADSVRLWGTVIHRMKECLQDFLKNGL
IHKVQIDTYQREIERYGVETINWSESLFFYDSIAITEFLELLNGDQGEEYRWLLALLNVD
RLLDDFGLTLYEKFQLVSQLREYFYQEANKGSQSKKLWISLNNGYRAKARDIYDMLEKGT
NKMEDVREAVDCFKRRSERNRLITKELVPLLEQAHSPQQVSLSSFVSSHVHMTLNRTFLA
KQRIHETVIYHYLAKYYDSKIAREGSVSKKINASVTA