Protein Info for CA264_09315 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: DUF5009 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 387 transmembrane" amino acids 21 to 42 (22 residues), see Phobius details amino acids 55 to 77 (23 residues), see Phobius details amino acids 98 to 115 (18 residues), see Phobius details amino acids 131 to 152 (22 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 216 to 236 (21 residues), see Phobius details amino acids 248 to 266 (19 residues), see Phobius details amino acids 278 to 297 (20 residues), see Phobius details amino acids 317 to 333 (17 residues), see Phobius details amino acids 358 to 377 (20 residues), see Phobius details PF16401: DUF5009" amino acids 18 to 120 (103 residues), 28 bits, see alignment E=1.6e-10 PF07786: HGSNAT_cat" amino acids 18 to 172 (155 residues), 41.1 bits, see alignment E=1.6e-14

Best Hits

KEGG orthology group: None (inferred from 55% identity to psn:Pedsa_1010)

Predicted SEED Role

"N-acetylglucosamine related transporter, NagX" in subsystem Chitin and N-acetylglucosamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YS10 at UniProt or InterPro

Protein Sequence (387 amino acids)

>CA264_09315 DUF5009 domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MANAVAESSPLTRVTSERYLSLDVLRGLTVALMVIVNTPGSWGSIYPPLRHAPWHGFTVT
DLVFPAFLFAVGNAMSFSMRKFSLQPDSVFLKKVFKRTALIFLIGVLLRCYPFVAHAEGG
GLELIDFSTVRILGVLQRIALCYLIGSLVVHYLKVKGSVIFSAVVLLGYWAALYFFGDQP
DPYSLEGNAALKFDLLLFSPEILYKGYGIPFDPEGLLSTLPAAVNVIAGYLVGVFIQRSG
NNLGTVLKLNLAGAAVIAVALVWDLVFPINKALWTSSYTLHSVGLVMVVLGTLMLVIEVA
KLKKWTYFFEVFGKNPLFIFSMSVLVIKTLSFIKVDEETRLSRWIYQNWFLSWGEGEFAS
LMFALAYMLLHWLMGYWMDRNRIYIKV