Protein Info for CA264_09275 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: epimerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 490 transmembrane" amino acids 455 to 476 (22 residues), see Phobius details PF01370: Epimerase" amino acids 3 to 111 (109 residues), 35.2 bits, see alignment E=1.4e-12 PF13460: NAD_binding_10" amino acids 7 to 145 (139 residues), 44 bits, see alignment E=3.4e-15 PF11066: DUF2867" amino acids 332 to 471 (140 residues), 122.5 bits, see alignment E=2.6e-39

Best Hits

KEGG orthology group: None (inferred from 59% identity to mtt:Ftrac_1418)

Predicted SEED Role

"Putative nucleoside-diphosphate-sugar epimerase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRU5 at UniProt or InterPro

Protein Sequence (490 amino acids)

>CA264_09275 epimerase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKILLTGANGYIGKRLLPLLVELGHEVVCVVRDPRRFHLPDTLKEKLHIVKGDLLQPGGL
NELPTAIEAAFYLVHSMGSGRDDFSEAEQEAAQRFAAYLDTTAAKQVIYLSGISNDRQLS
KHLASRRRVEDVLATARASLTVLRAAIIIGSGSASFEIIRDLVEKLPVMVTPKWLNSRCQ
PIAIRDVLFYLTEVLGREACYGRRFEIGGPDVLTYRQMLLKLAEVRHLKRYIVTLPVLTP
RLSSYWLYFVTSTNYSLSQSLVDSLRNDAVVRDHSIDKVIPHRCTPYTEAVSLAFSKIEQ
NSVVSSWTDSLVSGTMPLNYMDFVQVPAYGVLTDRQRVKFDRPPGEVLANIWSIGGERGW
YKTDFLWRIRGLLDKMVGGVGLRRGRRSPHHVEAGDTIDFWRVLVADRQHRRLLLYAEMK
LPGEAWLQFKISEEPDGNYLEQLAVYRPNGLLGRLYWYAVLPFHFIIFGGMVRNIIRYGA
EEETQRQHSG