Protein Info for CA264_09080 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: FUSC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 39 to 58 (20 residues), see Phobius details amino acids 67 to 99 (33 residues), see Phobius details amino acids 106 to 126 (21 residues), see Phobius details amino acids 136 to 155 (20 residues), see Phobius details PF06081: ArAE_1" amino acids 14 to 152 (139 residues), 48.4 bits, see alignment E=1.1e-16 PF13515: FUSC_2" amino acids 30 to 149 (120 residues), 52 bits, see alignment E=7.8e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRS9 at UniProt or InterPro

Protein Sequence (350 amino acids)

>CA264_09080 FUSC family protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MPKTFDFFARFGLSLQIVKTALAAATSWLVATTVLGSDFPYFAPLASILTVQVTVADSVE
KATQRIIGIIGGVAVSLLIGHWFSISSFSIFLVIITGMWISKGLRMNPQIVSQVAVSSFL
VLAFGLQEEGYALERVLETLMGSVVAVLINALIVPQNAIPEVEKSILALGEQGTKTLQFL
ARQLRQTEKGQLVGRQETDALIAATEASIKALQLAEQSLKYNPFLTHKRTRLSRLAVSVK
RLEHITTQIRGIRRGIADLNSAHIFETDLQDTQALQEAMEATASCITLFSRTMVEQQERH
HPALLASIQEANKLQSHCLESLRSIKSNRTLRDIGSILTDLSRILAEAER