Protein Info for CA264_09010 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: PAS domain-containing sensor histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 508 TIGR00229: PAS domain S-box protein" amino acids 157 to 267 (111 residues), 29.9 bits, see alignment E=2.5e-11 PF08448: PAS_4" amino acids 159 to 216 (58 residues), 25.9 bits, see alignment 1.9e-09 PF00512: HisKA" amino acids 291 to 354 (64 residues), 31.1 bits, see alignment E=4e-11 PF02518: HATPase_c" amino acids 403 to 507 (105 residues), 81.4 bits, see alignment E=1.3e-26 PF14501: HATPase_c_5" amino acids 404 to 496 (93 residues), 24.8 bits, see alignment E=3.5e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRP7 at UniProt or InterPro

Protein Sequence (508 amino acids)

>CA264_09010 PAS domain-containing sensor histidine kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MSAILYTGLHDATLELLKSGLQDGGVAFSEIRESEIKSLQATLARYSVLVVGEEVHNPVR
VAQEAYAGDKHLSVLLVNDEQNFVRVKQSLQFSPFIGPTVTCVSNQVRERLVSIVQDAIL
RSEQRRSFQHIRKSVSPQMDLNASVLDKVRGDYTAKVLEVAPIGAVLVSGQGNVLTINAY
AAHLFGKTEREILGASLRELFPAEVQPAVQLFVSQAPIREPKKVFELRLQEQVKYLEASL
AQVNAQRADGLQLLIINDITATVQAQQHTQAHLEELERMNAHLTRLNADLDTFVYTASHD
LKSPILNIEGLVGLLEASLGEGTQVVAEELKHIKASVQRFKNTVEDLTEVARIQRSFEQE
AALLQVDQLVEEVKELISFQLSAAQAQIDLDCSGAPQVHFAKRNLKSILYNLISNAIKYR
SPGRKPHIQVKTWQENGLFVLQVQDNGLGIPANKKEKVFELFKRIHVHVKGTGIGLYIAK
RIVQNNGGSIQLDSVEGEGSTFTIRLKV