Protein Info for CA264_08960 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: haloalkane dehalogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 294 PF00561: Abhydrolase_1" amino acids 38 to 278 (241 residues), 94.5 bits, see alignment E=8.4e-31 PF12697: Abhydrolase_6" amino acids 39 to 283 (245 residues), 50.9 bits, see alignment E=3.3e-17

Best Hits

KEGG orthology group: None (inferred from 57% identity to gfo:GFO_2069)

Predicted SEED Role

"alpha/beta hydrolase fold"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRP2 at UniProt or InterPro

Protein Sequence (294 amino acids)

>CA264_08960 haloalkane dehalogenase (Pontibacter actiniarum KMM 6156, DSM 19842)
MSNDKEVKQVLEEHRAAGRYIEVDGIRTFVLDEGAGEAVFCIHGVPTSSFLYRKVIKALA
RKGMRGVCLDLPGLGLSDRPKDFNYTFHTFARFCARAAEVLGIQQYHLLIHDIGGPIGFA
MAAENREKVLSLSILNTWINVDTFKKPLPMRPFEMPVLGEAELKSITHPTWYLLFTQMGV
EHADAVPKEEAYAYVDLLKREDGGDAFLKIMRHFEKSDVFRNLCYQAVENVPYPVQAIWG
AEDPGLTYERYGEEIKLAANLKEVHKLNAKHFLQEEKPEEIAALVVEQAARGKA