Protein Info for CA264_08840 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: DoxX family membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 151 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 86 to 103 (18 residues), see Phobius details amino acids 115 to 137 (23 residues), see Phobius details PF07681: DoxX" amino acids 23 to 102 (80 residues), 43.4 bits, see alignment E=2.3e-15

Best Hits

KEGG orthology group: None (inferred from 54% identity to sli:Slin_2336)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRR9 at UniProt or InterPro

Protein Sequence (151 amino acids)

>CA264_08840 DoxX family membrane protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNLTHDMNRVGRWGDTHHPVWLDFLRVALGIFLLVKGVMFVQDTEALFSIMRKSQFPWVS
IGLAHYVAFAHLVGGLLIAMGLLTRVAILFQIPILLGAVFFINPERGFYSENTELWTSVI
VLFLLIFFLVFGSGRFSVDHLIRKPKRDWLY