Protein Info for CA264_08465 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: catalase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 508 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00199: Catalase" amino acids 26 to 405 (380 residues), 582.2 bits, see alignment E=5.3e-179 PF06628: Catalase-rel" amino acids 431 to 494 (64 residues), 82.2 bits, see alignment E=2.4e-27

Best Hits

Swiss-Prot: 59% identical to CATA_VIBPA: Catalase (VPA0305) from Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)

KEGG orthology group: K03781, catalase [EC: 1.11.1.6] (inferred from 62% identity to mxa:MXAN_4389)

Predicted SEED Role

"Catalase (EC 1.11.1.6)" in subsystem Oxidative stress or Photorespiration (oxidative C2 cycle) (EC 1.11.1.6)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.11.1.6

Use Curated BLAST to search for 1.11.1.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRH0 at UniProt or InterPro

Protein Sequence (508 amino acids)

>CA264_08465 catalase (Pontibacter actiniarum KMM 6156, DSM 19842)
MLRKTLLLLSLLACGQLSFAQQKTLTTNTGAPVGNNQSSKTAGENGPVLLEDVHLIEKLA
TFDRERIPERVVHARGVGAHGEFESYGDFSQYTKASLFNAKGKKTPVFTRISTVVHEQGS
PETLRDPRGFAVKFYTDQGNYDLVGNNMPVFFIRDAIKFPDMVHAFKPSPVYNRQDQNRV
FDFFSNVPEATNMFTYLYQDLGTPANLRQIDGFGVHAFKWVNAKGEVTYVKYKWTSLQGV
KSFSAEEAAQMQAKNHSHATADLYENINKGNFPSWELSVQLLKPEDLDKFDFNPLDPTKI
WPESIAPSMAVGKMTLNRVPDNFFETVEQAAFAPATLVPGIEPSEDKLLQGRVFSYMDTQ
RYRLGGNFQRIPVNAPLVEVNNFNQNGASSNRATKSDVNYQPSMAQPTFVDDSQYNYSTR
KIDAETMQRVISKQDNFKQAGDLYRSLSKTEKEHLISNLAGDLGQVKNKDVVNKMVSYFY
QADADYGNRLIKALKLNKNDVVALIASK