Protein Info for CA264_08310 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1377 PF01339: CheB_methylest" amino acids 27 to 202 (176 residues), 200.6 bits, see alignment E=8.7e-63 PF03705: CheR_N" amino acids 232 to 282 (51 residues), 48.4 bits, see alignment (E = 3e-16) PF01739: CheR" amino acids 295 to 485 (191 residues), 181.4 bits, see alignment E=6.8e-57 PF13596: PAS_10" amino acids 742 to 847 (106 residues), 83.6 bits, see alignment 7e-27 TIGR00229: PAS domain S-box protein" amino acids 1011 to 1138 (128 residues), 34.6 bits, see alignment E=9.2e-13 PF08447: PAS_3" amino acids 1037 to 1123 (87 residues), 64 bits, see alignment 6.1e-21 PF00512: HisKA" amino acids 1153 to 1220 (68 residues), 28.6 bits, see alignment 6.1e-10 PF02518: HATPase_c" amino acids 1269 to 1375 (107 residues), 78.6 bits, see alignment 2.4e-25

Best Hits

Predicted SEED Role

"Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)" in subsystem Bacterial Chemotaxis (EC 2.1.1.80)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.1.1.80

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRC9 at UniProt or InterPro

Protein Sequence (1377 amino acids)

>CA264_08310 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MPDSNELMPAPAPAQKKYIKPADHYLVGIGASAGGLEAIHDLFDHFPNNSSFSFVIIQHL
SPDHKSLMAELLSKHTRMQVQEAEDKMHTKPNCVYVLPSGKQLTLEHGRLRLAEKARNRE
PNFAIDLFFESMAKDRGQYAIGVVLSGTGTDATKGARAIKEAGGMVVVQDPETAKFDGMP
RSAIDTGFVDYVLPPARMPEEILAYTRNIPLPVSAAMEEEDEKEEGADEVVLEQILDLVR
SQTQTDFTNYKQATINRRIRKRMEGLQVSSLRSYLAYLHKHPGESKQLCQEFFINVTRFF
RDAEAFEVLEQEVIPAIIARKGQDETIKVWVAACSTGEEVYSLAILFREAFDKLGQEPRV
KLFATDIDQRAITQASKGMYPAAIVKEVTEERLHRYFHQKGHRYVVNEDVRKLVVFAQHD
LQKDPPFSHIDLISCRNMLIYLNPGLQKKVLSLFPYALNMNGYLLLGPSEHIGELKSFFT
EENRKWKLFRKVKETRGKQKPYGVSDYSSVIRQSSQSSSFASAQVSRYSDAFMDAVVEDF
KVTGLYVDENYQLLHGIGDINRFLKFPDKRFHFNLIKMVPEELAVTLSVGIRKALKQDRK
VVARQVAVKMDKKEQMIHVSIRPISIEKGQAKVILVLLQEVGEVSPLPKISELSLVSDSD
YYKQLSALEMELNEARESLQLTVQDLSTSNEELQSSNEELMSSNEELQSSNEEMQSLNEE
LHTVNSEHQLKIRELQELNEDLDNYIRSSNVGQIFVDHDLVIRKFTPSVESLINIIETDL
GRPIHHLSHNLKYSRLIEDIQQVNNNSQEVEQEVETKSGRYYLMRIIPYLKHNGNKDGVV
ISFVEVTTLKTLSNVVQGVLNSSLSSIMAFSANRDDRDAIEDFSWSLLNRKAEGLLGASH
AELLHSSVLATMPFLKKNGLFKKFVNVVETGLPLHMEQPLEINGQKAWYEIAAVKMGDGL
TVTMADVTAKKNSEEKVMQAYEDLKKAEEDLIKLNSELEKRVTDRTQALGASEERFRLVS
MATNDVVWDWNLVTNDIWWSDSLNHMLGYESDEWGKGVNGWFNRVHADDRDRVVKGINKA
INYGKDQWADEYMIEKADGSYAYVSNRAYIMHNEYGVPYRILGSFIDLSDLKETQEELQL
TNDHLLRVIADLDTFVYTASHDLKAPVANIEGLLLLLEEQIGSAGPIPGEPTQPLFEMLK
DSIRRFRNVIKDLTDIAKVQRDVDGETEPIEFQEVMDDVLANMQELLTKEGAQVEVDFKY
ASKVEFSRKNLYSILYNLLSNSIKYKSPDRPPKVSFTTEKVDGYMLLSVQDNGLGMSEDN
LSKMFTLFKRFHSHVDGTGMGLYIVKRMMDNANGMIEVESEQGKGTTFKLYFKREKS