Protein Info for CA264_08295 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: FeS assembly SUF system protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 103 PF01883: FeS_assembly_P" amino acids 7 to 76 (70 residues), 79 bits, see alignment E=1.3e-26

Best Hits

Swiss-Prot: 43% identical to SUFT_BACSU: Fe-S protein maturation auxiliary factor YitW (yitW) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 62% identity to cpi:Cpin_3350)

Predicted SEED Role

"PaaD-like protein (DUF59) involved in Fe-S cluster assembly"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRD8 at UniProt or InterPro

Protein Sequence (103 amino acids)

>CA264_08295 FeS assembly SUF system protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNASEIRDKVEDALRTVHDPEIPVNIYDLGLVYEIKVTEGSKVQVTMTLTAPACPVADDI
MFEVQQKLEAIEGVEDAFVMLTFDPPWTRDMMSEEAKLELGFL