Protein Info for CA264_08200 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 transmembrane" amino acids 16 to 34 (19 residues), see Phobius details amino acids 93 to 115 (23 residues), see Phobius details amino acids 158 to 181 (24 residues), see Phobius details amino acids 201 to 223 (23 residues), see Phobius details amino acids 243 to 262 (20 residues), see Phobius details PF01292: Ni_hydr_CYTB" amino acids 8 to 233 (226 residues), 64.1 bits, see alignment E=1.5e-21 PF00174: Oxidored_molyb" amino acids 325 to 467 (143 residues), 107.5 bits, see alignment E=5.7e-35

Best Hits

KEGG orthology group: K07147, (no description) (inferred from 46% identity to mjd:JDM601_3093)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YRF8 at UniProt or InterPro

Protein Sequence (492 amino acids)

>CA264_08200 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
METQALDFPLWLRVTHFFNFLFMTLLVRSGIEIIGAHPMFYWNNDCEPGSEWLNFLNKKV
ERNTLWTAEDEIRPLSPWLALPGRNNLGLGRHWHLWSVVGWLLSGILYMTLLFLTPHWQR
LVPTSWSIFPEAWQAFKTYLSLELPAAGNPYNPLQQLTYFLLVFALTPLVILTGILMAPA
ISARYPKLTAFLGGRQVARSIHLLGLVAYVFFFLIHLFMVVAHGLEHKLANMVLNNEYDT
NHLALAIGFAAIALVIGLNIFATKVSLKHPFQTKKALEVGIDSLRRFFFHHQHSVQDHQK
ISPTPRANGQPPRNTAYTRHLAEEFKNFTFEVRGLVEKPLDLRLDQLKALPKQEQSTLHV
CVQGWSYYATWGGVRIENLLALCKPLPDAKYLVFHTLDEKWEKPEVDGYYYEVIDMELAR
KPQTILAYEMNGAPLPIAHGAPLRLRLESQLGYKMAKYVCGVELVEDFSHIGKGQGGWRD
DVLNYYVKTAGI