Protein Info for CA264_08005 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: phosphonate ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 239 PF00005: ABC_tran" amino acids 25 to 172 (148 residues), 106 bits, see alignment E=2.6e-34

Best Hits

Swiss-Prot: 46% identical to FTSE_BACSU: Cell division ATP-binding protein FtsE (ftsE) from Bacillus subtilis (strain 168)

KEGG orthology group: K09812, cell division transport system ATP-binding protein (inferred from 65% identity to sli:Slin_3028)

Predicted SEED Role

"Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)" in subsystem Bacterial Cell Division (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YR93 at UniProt or InterPro

Protein Sequence (239 amino acids)

>CA264_08005 phosphonate ABC transporter ATP-binding protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNFSSSPVVSLRDVAIYQDVNTVLSSVNFDIEKGEFVYLVGRTGSGKSSLLKTLYGDLPL
LVGQGAVAEFNLGKLPRKQVPYLRRKVGIIFQDFQLLFDRSVAENLAFVLRATGWRDKSK
RKQRISEVLMRVGLDAAANKMPHQLSGGEQQRVVVARALLNEPVILFADEPTGNLDPLVA
DEIMQLFQEINNQGTAVLMATHNYEIINRYPRRVLKCEKGHVLDSNVQEFSLISGYQAS