Protein Info for CA264_07835 in Pontibacter actiniarum KMM 6156, DSM 19842
Annotation: RNA methyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 42% identical to Y064_SYNY3: Putative RNA methyltransferase slr0064 (slr0064) from Synechocystis sp. (strain PCC 6803 / Kazusa)
KEGG orthology group: K07444, putative N6-adenine-specific DNA methylase [EC: 2.1.1.-] (inferred from 47% identity to zpr:ZPR_1851)Predicted SEED Role
"Methyltransferase (EC 2.1.1.-)" (EC 2.1.1.-)
KEGG Metabolic Maps
- Alkaloid biosynthesis I
- Anthocyanin biosynthesis
- Benzoxazinone biosynthesis
- Biosynthesis of alkaloids derived from shikimate pathway
- Carotenoid biosynthesis - General
- Flavonoid biosynthesis
- Histidine metabolism
- Insect hormone biosynthesis
- Naphthalene and anthracene degradation
- Phenylpropanoid biosynthesis
- Porphyrin and chlorophyll metabolism
- Tryptophan metabolism
- Tyrosine metabolism
- Ubiquinone and menaquinone biosynthesis
Isozymes
Compare fitness of predicted isozymes for: 2.1.1.-
Use Curated BLAST to search for 2.1.1.-
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1X9YR45 at UniProt or InterPro
Protein Sequence (391 amino acids)
>CA264_07835 RNA methyltransferase (Pontibacter actiniarum KMM 6156, DSM 19842) MAKNISKENFNITVTTLAGLEEVLAEELQALDMEFIKVGNRAVSCSGNLRQLYEANLWCR TAIRVLKPIRNFKARDEKDLYEQVQKTDWTEIMDLGMTFAIDAVVSHSTFEHSLYVSQLA KDAIVDQFRKKTGERPSVDRVRPDVRLNLHMHENMVTLSLDSSGDSLHRRGYRLQTNVAP LNEVLAAGIIALSGWDRKSTFIDPMCGSGTFLIEAALMAQNMAPGLFRRDPYGFEKWKDY NEALFEMVWTTAEAKAKTVAQAEIIGYDLDADYIEAARGNIENAGLQNIIKLEQANFFQT SSPSEQGVVVMNPPYNERIQSDDINLLYKNIGDTLKQNYQGYDAFVFTGNLEAAKNVGLR TSRRVPLYNGSIECRLLKYELYRGSRKGGEK