Protein Info for CA264_07190 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 199 PF01346: FKBP_N" amino acids 4 to 101 (98 residues), 99.8 bits, see alignment E=1.3e-32 PF00254: FKBP_C" amino acids 108 to 196 (89 residues), 108.3 bits, see alignment E=2e-35

Best Hits

Swiss-Prot: 49% identical to MIP_LEGLO: Outer membrane protein MIP (mip) from Legionella longbeachae

KEGG orthology group: K03773, FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC: 5.2.1.8] (inferred from 53% identity to nwa:Nwat_1105)

Predicted SEED Role

"FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)" (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQV1 at UniProt or InterPro

Protein Sequence (199 amino acids)

>CA264_07190 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MDLKEKISYIIGRDMATNLKKQGIEVEAESFMKGLKDVQAGNASSLSQQEVQEAMMALQQ
EMAQKQSAAGNENKQAGEEFLAANKSKEGVHTLPSGLQYMVLQEGTGKSPSANDTVTTHY
HGTLIDGTTFDSSYERGQPATFPVNGVIAGWTEALQKMKEGAKWRLFVPANLAYGAQGAG
DVIGPNSTLIFDVELLQVK