Protein Info for CA264_06955 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: LLM class flavin-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 TIGR03558: luciferase family oxidoreductase, group 1" amino acids 11 to 330 (320 residues), 399.1 bits, see alignment E=7.3e-124 PF00296: Bac_luciferase" amino acids 20 to 307 (288 residues), 135.4 bits, see alignment E=1.4e-43

Best Hits

KEGG orthology group: None (inferred from 76% identity to pin:Ping_0513)

Predicted SEED Role

"Flavin-utilizing monoxygenase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQQ2 at UniProt or InterPro

Protein Sequence (335 amino acids)

>CA264_06955 LLM class flavin-dependent oxidoreductase (Pontibacter actiniarum KMM 6156, DSM 19842)
MATTEKNIPYSVLELATVAAGSTPGDALKNSLELARKAEEMGYTRFWLAEHHNMVSIASS
ATSVLISYIAAGTKKIKVGSGGIMLPNHSPLIVAEQFGTLGALFPDRIDLGLGRAPGTDQ
VTAHAIRSDRMQSVYKFPEEVSQIQQYFSPDNRAAQVRATVAEGVGVPIYILGSSTDSAY
LAAEKGLPYAFASHFAPGQLFEALSIYYNNFKPSEYLQEPYTIACINVIAAETDQEAERI
STSLIRMMFGVLTGNLDYLQAPTDMTPDLRELLQNPAFERMLKYAFIGSKETVKEKTEAF
IQETGVNEVMVVSHIYDQQDRVNSYRIFSEIMQRR