Protein Info for CA264_06610 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: iron-dependent repressor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 PF01325: Fe_dep_repress" amino acids 6 to 62 (57 residues), 57.2 bits, see alignment E=2.4e-19 PF02742: Fe_dep_repr_C" amino acids 65 to 134 (70 residues), 106.2 bits, see alignment E=1.1e-34 PF04023: FeoA" amino acids 147 to 217 (71 residues), 33.4 bits, see alignment E=5.7e-12

Best Hits

KEGG orthology group: K03709, DtxR family transcriptional regulator, Mn-dependent transcriptional regulator (inferred from 60% identity to chu:CHU_2024)

Predicted SEED Role

"Mn-dependent transcriptional regulator MntR" in subsystem Transport of Manganese

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQM2 at UniProt or InterPro

Protein Sequence (219 amino acids)

>CA264_06610 iron-dependent repressor (Pontibacter actiniarum KMM 6156, DSM 19842)
MSHSYTEENYIKAIYKLSASGLQEVNTNAIAEALDTKAASVTDMLRKLSGKGIVNYVKYK
GVSLTEAGERVALQIIRKHRLWETFLVEKLRFNWDEVHEVAEELEHISSTLLTKRLDEFL
GYPKFDPHGDPIPTENGEMKLKKQQLLGDMALGNEGKVVGVSDSQPLFLQFLDKVGIGLG
SHIKIIDRILYDNSLEIELDGQKQLLISCEVSKNIYLSA