Protein Info for CA264_06080 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 758 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13715: CarbopepD_reg_2" amino acids 24 to 109 (86 residues), 64.5 bits, see alignment E=1.9e-21 PF13620: CarboxypepD_reg" amino acids 24 to 98 (75 residues), 56.6 bits, see alignment E=7.2e-19 PF07715: Plug" amino acids 119 to 224 (106 residues), 65.4 bits, see alignment E=1.6e-21 PF00593: TonB_dep_Rec" amino acids 300 to 721 (422 residues), 104.5 bits, see alignment E=3.1e-33

Best Hits

Predicted SEED Role

"TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQ92 at UniProt or InterPro

Protein Sequence (758 amino acids)

>CA264_06080 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MQHLLLTWTLLALTLTALAQQTGIKGSVYAAQLPVPYASVVLKNIAHGTPTDESGGFELT
GLEPGRYELVVSAIGYRPATRTIVVKDGMVLSLLITLESRNEALNEVVVTGTRLERRRLE
SPVAVNVLDSRTFNLTQSNTLAEGLCFQPGLRMETDCQTCNYSQLRMNGLGGSYSQVLVN
SRPIFTSIMSLYGLEQIPVNMVDRVEVVRGGGSVLYGSSAIAGTVNIITKEPEESSFTLA
SNTSLIGGEAWDSFSNANVNAVNPERRAGASFFASHRDRQAYDANGDGFSEMARLKNNSF
GFSAFFTPTEQDKVDINGWSIYEERQGGNKLDKPADQADQSEYRLHNILVGGFNWDHRLK
NSRASYSLYGSGQHTGRTHYTGLDQSDGWGKTKSHTLQGGFQFNYSLRNFLGGTNTLTAG
AEHQYDNTFDAIEAYAYLVDQKTHLTGLFLQSDWELNPNLTLLTGVRANKHSNVNKLILT
PRLSALYKLGATTQLRASYARGFKAPQAFEADLHIAFAGGGVSLVQLSPSLQEETSDAFN
ASVDFNKASEHMIFGFTLDAFHTRLYDAFVLEEIGADQQGNQQLLRKNGSNSTVKGLTLE
GRLNYDQLFQLETGLTVQQSRYDEPVAWSTDIAGTSNYLRTPEAYGYYVLTLWPERRFTM
ALSGVVTGPMQVPHFAGAPGVVEDVLYTSPTFVENNLKLAYRFTLPSIQNDLQISAGVQN
ILEAYQRDFDTSKYRDSNYVYGPARPRTFFVGLKFGLM