Protein Info for CA264_06060 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 609 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF01401: Peptidase_M2" amino acids 38 to 605 (568 residues), 366.1 bits, see alignment E=1.8e-113

Best Hits

KEGG orthology group: K01283, peptidyl-dipeptidase A [EC: 3.4.15.1] (inferred from 60% identity to llo:LLO_1982)

Predicted SEED Role

"Dipeptidyl carboxypeptidase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.15.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQD2 at UniProt or InterPro

Protein Sequence (609 amino acids)

>CA264_06060 peptidase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKKLIFTGLTAAVLLSSCSSQKTEGAGTEATAVMTEVQQEAQTFLDQYSQTYQDLYTKSA
EAEWASNTRIVEGDTTNAAATRRANEAFAAFTGSAENIEKAKAMLKKKDQLTPLQVKQFE
AILYAGANNPQIIPEVVKARIKAETEQTEKLYGFDYRIYEKSVSTNDIDNILKDEKDLKK
RLDAWQASKEVGPGLKEGLLDLRELRNKTVQSLGYDDYFTYQASDYGMSRPEMMELMQQI
NKELRPLYRELHTYARYELAKKYGAKEVPDYLPAHWLPNRWGQDWSSMVNVEGIDLDAAL
KPKGAEWLVQQGERFYTSLGFPSLPQTFYTKSSLYPLPANANYKKNNHASAWHMDLDKDV
RSLMSVEPNSEWYETTHHELGHIYYYMTYTNPDVPVLLREGANRAYHEAIGSLMGLAATQ
KPFLAELNLIDKNTQTDEVQTLLKEALNYVVFIPFSSGVMSEWENDFYANNLPADQLNKR
WWELKKQYQGIVPPTDRGENYLDPATKTHINDDAAQYYDYAMSYVILFQLHDHIARNILK
QDPHATNYYGSKEVGNFLRDIMYPGASADWREMLKEKTGEELSARAMVAYFQPLMDYLKE
QNKGRKYTL