Protein Info for CA264_05935 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 968 PF12705: PDDEXK_1" amino acids 666 to 966 (301 residues), 105 bits, see alignment E=3.4e-34

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQ71 at UniProt or InterPro

Protein Sequence (968 amino acids)

>CA264_05935 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MQTFLELTAKYVYEKYKENISDLCVVLPSRRASFFFKTALAQAAPDPIWSPEVYAMEDFI
RSLSKTDVLEPINLQLELFDLMREQDPKLDFDNFVTWAGTLLEDFSRIDQNLVATDKLFE
YLGEAKALERWDPKFLGKELSPTLKKYFSLWDNIEKTYHNLQRRLLDKKQAYTGMAFRKV
AETIEQIARTSECHQFIFIGLNSLTRSEEKIIRTLLKYEKAEVLFDSDDFYMEGDSPNRA
GGFLRSYKSTWGMPEWRWQQNLLQTDTKEINVIGVANASMQGKLAGQLLQEIRQQDKHAQ
TAIVLPDETLLLPVLHSIPEDVPTYNVTMGLSFRGTPLFNLIDLLFEVHLTGVTQLQASG
YKVYQYHHLSVTKLLTHPFIRRYELYLGDQPEKARYHGMIQQVLDKMVQENKVLITAQEL
IELSQHHPLFETLFRTWRDCDDIIVAMYELIELLREVYTHGRNSIETEYLYIFYTLVKRL
DTIFDCREHKISVRSFRKFLYELISQTRLPFSGEPISEVQIMGMLETRALDFENLIILSV
NENVLPAPKRQESLMPYDVLREFGLPTYAETEGTMAYNFYRLLQRAKKINLLYVLPSDTY
GSGEKSRFILQLQNDLALRNPNITFRDLTASVELQETRKYSEDIIIEKTPETLTALRAEL
ERGLYPSHLNMYINCSLQYYFTRIAKMQEVDEVEEQLGADQFGTIVHQVLEDFFRPHEQS
GDPLLAGHVEQMLQALPDKVKREFSKVTLGAKPERGMNYLLYKVAVEVLEKYLQKLKDSD
ELPLYVLRLEQTLATTLPVQVGNEVVNVRIAGKADRIDLTGPELRVIDYKTGKVEQNQLR
VKPEDVSLHFLTDQKYGKARQLWLYEYVLKRVLEEQPETILRRAGHISPQSIQPKSGILS
FRNLEPGVLSSEFNFTEADGATPKDFVAASEELLGDFVRRMLDPEEPIRKTQDLDVCQWC
AYRGICAR