Protein Info for CA264_05535 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 377 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF13432: TPR_16" amino acids 121 to 179 (59 residues), 16.7 bits, see alignment E=5e-06 amino acids 227 to 285 (59 residues), 23.1 bits, see alignment E=5e-08 amino acids 260 to 302 (43 residues), 23.1 bits, see alignment 5e-08 PF13181: TPR_8" amino acids 253 to 286 (34 residues), 27.6 bits, see alignment 1.2e-09 PF13414: TPR_11" amino acids 266 to 301 (36 residues), 38.1 bits, see alignment 5.3e-13 PF13431: TPR_17" amino acids 275 to 301 (27 residues), 27.9 bits, see alignment (E = 1e-09) PF14559: TPR_19" amino acids 327 to 375 (49 residues), 28.4 bits, see alignment 9.6e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPW8 at UniProt or InterPro

Protein Sequence (377 amino acids)

>CA264_05535 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKKVLLTALVAGTISVASAQNSAVNSAILNHKNGTLDKALTDIEKATEHKKTKDKAKTWF
YRGVILQDMIGNPIYGKQTDEKTPITVLESYNKAVELDGENGEYGKQVPERKQMLYGQVL
NQAVEYHNNQDWPNAINKYELAHKISPQDTTAVLYAAYAATADNKYDQAIGFYNELLDMG
HKTEDVYKAKVQLQQATEASDEAVMETLANGLKEHPNSVYLMQEELKYYLKNDRADEAMA
KLDKAIAADPKNASLYAVKGNLQERKKNFDAAKETYKKAIEVDPTNFDAYYNLGVLEYNQ
GADVNNKAAKMDYATYQKKGKALEAEAKKHYQAALPYFEKAHEIQPEDKATMQNLVNVYT
RLGRKSDAEKISAQLNK