Protein Info for CA264_05190 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 734 transmembrane" amino acids 439 to 457 (19 residues), see Phobius details TIGR01007: capsular exopolysaccharide family" amino acids 504 to 713 (210 residues), 147.2 bits, see alignment E=2.3e-47 PF13614: AAA_31" amino acids 527 to 649 (123 residues), 52.4 bits, see alignment E=6.4e-18 PF01656: CbiA" amino acids 530 to 701 (172 residues), 25.5 bits, see alignment E=1.1e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPS9 at UniProt or InterPro

Protein Sequence (734 amino acids)

>CA264_05190 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MVSGDAAQGASPAALLYGTDLYKGAQGLTNESIILKTKSLALRTLSKLDFRVSYFIKGNV
LLSEAYKAEAPINVLFDSTAASVPYGVEFRVDLVDNNTYTLSTENLVWQEKVTDKTFLFG
KSYLMDGFAFTINLLKPEPFEGNEVLFVINDLDDLAKSYASNLSVAPYGGDASALVLTLT
GTTPKKDIDYLNAHMVTYAQNNLAIKNADAVNTLSFIDQQLQQISDSLYFIESRLEDFKK
RNAAMDLSAEGAKVAGELQALEQRKAELLMNSRYYDYLSNYLQKEETNEQIQAPATLGIG
DPVLNSLVSQLVTLQTELSVASNNQGQSNPGIKLKRQQLNEVRASLLENLSSLEDANQIA
LRNLNQRIQTAAAALQQLPSSERQLINIQRLYSLSENLYVFLMEKRAEAGIAKAANTSDV
TILKEGSINKQIAPQPLQNYGIAFIIGFGLPLAFIFVKELLNNKIHTVEDIAKYTAMPLL
GLVGHNKKESNLLANMSPKSALAEAFRTVRSNLRYMTSVGDGVQEGGKIIVITSSISGEG
KTFSAKNLAYIIAISGERTLLVNADMRKPNNNTDLGVNSSTGLSNFLAGHISLEEVIHTT
IQENLHVLPSGDIPPNPSELLLSGRMSAMVAELKERYDYIIMDTPPVGILSDGLELMQIA
DANVFMVRQDYTIKDFLRNIQLQYESGKIKNTAILFNDVDYKKLNYGYGYGYGYGYGYYA
EDNETKSLWKRIRV