Protein Info for CA264_04935 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1046 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF13432: TPR_16" amino acids 84 to 130 (47 residues), 28.2 bits, see alignment (E = 1.3e-09) amino acids 444 to 503 (60 residues), 16.1 bits, see alignment 7.5e-06 amino acids 736 to 797 (62 residues), 31.5 bits, see alignment 1.1e-10 amino acids 774 to 834 (61 residues), 21 bits, see alignment 2.2e-07 amino acids 886 to 936 (51 residues), 17.7 bits, see alignment 2.3e-06 PF13525: YfiO" amino acids 513 to 622 (110 residues), 33.2 bits, see alignment E=2.6e-11 PF13174: TPR_6" amino acids 584 to 616 (33 residues), 21.1 bits, see alignment (E = 2e-07) amino acids 621 to 653 (33 residues), 16.2 bits, see alignment (E = 7.4e-06) amino acids 659 to 690 (32 residues), 13.6 bits, see alignment (E = 5.1e-05) amino acids 738 to 764 (27 residues), 13.9 bits, see alignment (E = 4e-05) amino acids 956 to 985 (30 residues), 16 bits, see alignment (E = 8.3e-06)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPR7 at UniProt or InterPro

Protein Sequence (1046 amino acids)

>CA264_04935 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKIAYKVALASVLAGGSHVVVAQHTQVFTSEERYFHEGIELFDRAKYGSAQEAFKKYIEL
IGNDAKTADAQYYYALSGLYLLHPDAEQLVLDFVRKYPTHPKTALANYELGLYYFEQKDY
KKAVELLKDAPTHLLSIKQNNELEFKLGYSYFATKDFDNAKIWFDKNKTTGFREDEHRFA
YASNYYAGYISYRQGDYAAAKADLKIAEKNEAYANIVPYMITEILYKENDIYEVIRYGEA
ALARKPQVQQADEIALLVGDAYYQKADYKTAETYFNQYAKGKRSLDPVVQYKIAVTDYKN
NNYKNAIANFKEVALKKDALGQNAAYYLGLSYLKEDNKQFALTAFDQARKNDQDKDVTEA
AMLKYAQVSFELGNFREVINSLAEFNKNFPNSEQGEEADRLLSESYFGSNDYAAAIRHIE
SLEKKSWRILQTYQRVTYYHGVNLFNDSKFPQAVAMLDKSLQYPYDKEVTAASHFVKGEA
YSIGQRYNDAINSYAAVFRTAPNAKEDYYIKSRYGIGYAYFNTKEYDKALTHFKAYLDNI
KPSNPNYNDATVRLADTYYVNKNYNEALNLYERVIASSSPDRDYALFQKGAVLSILNRND
KAKDALQELINKYPNSRFRDDAMYQYAVVDFEAGNYQAAVQGFTKLINGVPDSKLVPNAL
QKRGIAYSNLRQNDLAIADQQRVLNEYPDSKVASGALYSLQEVLGQENRSNEFDQYVDKY
KSANPESNALESIEFEAAKTLYFNQNYAQAATKLENYLKAYPNSTFVPDARYYLADSYLR
NNNAAAGLKLMKQVVANNRSEFVNRAIQRVADMEFEAKNYTEAIKYYSRLRDLATNRKEQ
QTALLGLMQSYYRTNDYASAKRVAGELISQGNASLNAYNSALLFRGKATYAQANMEQALT
ELRETTASANDVNGAEAHYLISEILYKQKKYKEALDHAFEFSNKFGNYDFWLGKTFLLIA
DVYAAQNEMFQARATLNSIIENAPNQEIVAEAKQKLAKLDGTKAKSSQQAQPQNLQPGQK
APVETTVPPVEIDTTNAPVDTTGQQN