Protein Info for CA264_04895 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: peptidase M23

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 PF01551: Peptidase_M23" amino acids 76 to 170 (95 residues), 108.6 bits, see alignment E=1.5e-35 PF01476: LysM" amino acids 213 to 255 (43 residues), 56.9 bits, see alignment 1.6e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YXV8 at UniProt or InterPro

Protein Sequence (256 amino acids)

>CA264_04895 peptidase M23 (Pontibacter actiniarum KMM 6156, DSM 19842)
MEMSEEVLVDSTWIKIAGYYAIWDTRNINPYRMDGRQLKDTVDIKLYDPKQNRDYKMPLD
KTPITSHFGARGGRWHYGTDIDLDTGDSIVAAFDGVVRINKWDGGGYGNYIVVRHYNGLE
TLYGHMSKPIAKPGDFVKAGQLIGLGGSTGRSSGPHLHYEVRYQGNPMDPENLYDFPDYL
LKGDSYQITAAVFNYSNRARSGTSSSGRRAAYHKVRSGDTLSGIAKRYGVSVSQLTRLNG
ISTRTTLRVGKSLRIR