Protein Info for CA264_04660 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1512 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details PF04357: TamB" amino acids 1044 to 1476 (433 residues), 168.9 bits, see alignment E=1.1e-53

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPG6 at UniProt or InterPro

Protein Sequence (1512 amino acids)

>CA264_04660 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MEKEQSTNYFKVIGKAILKIVLGLFLFLLLLFAAVFVAIRFPAVQTKVAQRVATYLSEAT
KHEVTIGRVDIEFFSNVVLERLQVQDNRNKELFYIGRAEAEIDAFSIFNLNTLTISSLEL
QEPRANLVQYAGSDTLNLSSFFNALGDLFVKDTTKPAEPFNFQLGELIIKDGQFTYDDFN
DPRTDFGMDYSHLSITGLNGRFNEIQLEDTISVSVMDLQAVETRSNTRLHNLDTRMTYAA
TFWEWDALDLQINKSNLQHYVRFDYNTFSNFTEFIDSVTMTADLQHSKVYSQDIAVFAPQ
LREYNENLQVNSLNLKGKVKDFAATDVDLAYGEHTHIVGSVSADGLPNAEETFANLRLKP
STINARDIKQFLPQEAYEIAARLGTVKLEGRFLGFYNDFVANGDFATALGNLKSDINLKI
DDNTRTSSYSGFVTTRGFNLGRLLAIEDQVKTISMSGRLEGSGFTLSSANVKANVNVEQL
QLMGYNYQNIKADGILNRQVFTGEVSINDPNLIFTANGEVNLAEQRKAFNMVADLERVDL
QALQLTQEPLIISAEANLNFKGLKLDEFEGTAQFDSAYVSYQGNRLPLDSVLIRSDITEN
ERSLYLSSDLLALRVNGNFDYTTLIADLQALVQEYKLNFESDPAATAAYYSRKPNTAVND
YAVTYSMQLKHANPLLDLFLPELSISDSATVEGSFRHSSTAILELYAAIDTIQYQDYALY
GNAIELNTSKLQQNPDVLASALFTSQRQELPSAGNTQDFFVEGIWSERTIQFATSLRQPE
QNNRALITGDLNFLQNQVQVVFDESNITLQQNPWAFVPGNTIYISEGGQQLEFENFALVN
QNQVIRAEGTVSRDPDSRLVLNVENFNLNNLNPLLSMKIAGEVTAELVAQDIYNNAKVSG
AMQVDSFYLDQVYIGNIAGKTDWSKARAQATVDVGIERNNMKVLSLSGNYYPQAEEEQLD
LLAVMDKANLKLVEPVLRGLFSNLDGDMEGRIRVLGSLDYPVLKGSVMVSNGQFTFDYLN
TTYRFSDRIYFGPNSISFRNAQLQDLYGNKATVSGGIAHDGFQNMVIDLEARYRNFMVLN
TTEEQNELFYGTAFATGTASVLGPAENLQVNVDARSEENTRIVLPLDYQTTVSRKDFIKF
VNHNNRDSTGVEVAVEDEKVDLSGINLDFNLDVTDDAYFEIIIDRTTGDVIRGSGNGDIQ
MTIDTRGDFNMYGTFEITQGAYNLNLLEGLVTREFKVVPGGTITWNGDPTAGIMDITAHY
TQMASFDRLVQTEISGRYPVTAVIELEGPLLAPQIQLGLSFDQLPQQVQTQMYSLINSIK
SDESELNRQVFSLLVLQRLSPQGTLAFDSSVGAGAVGGSLGSLLSGQLNNLFNSIDSNLE
IDIGLGNIGQDALASLQVRLSYSFFQGRLRVTNETGFGNTAENAQGNSYVGDWLLDYYIS
QSGELRARLEYNSTPNIYTGRITQSQSISVLHTKRFDNLRELFGSEKRERRRQRLEMERE
RIILDSDPRLEL