Protein Info for CA264_04585 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 PF13439: Glyco_transf_4" amino acids 39 to 158 (120 residues), 46 bits, see alignment E=1.5e-15 PF20706: GT4-conflict" amino acids 145 to 288 (144 residues), 38 bits, see alignment E=2.5e-13 PF00534: Glycos_transf_1" amino acids 163 to 332 (170 residues), 109.3 bits, see alignment E=4e-35 PF13692: Glyco_trans_1_4" amino acids 176 to 319 (144 residues), 98.6 bits, see alignment E=9.7e-32 PF13524: Glyco_trans_1_2" amino acids 263 to 345 (83 residues), 26.6 bits, see alignment E=1.4e-09

Best Hits

KEGG orthology group: None (inferred from 49% identity to fjo:Fjoh_1035)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YY26 at UniProt or InterPro

Protein Sequence (359 amino acids)

>CA264_04585 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MINASGIGVYLKNLLPIISKEFKLTLLGDEKDLKLYCNSPGTNVIIASAPIYSIKEQLQL
ARKIPKCDLFWSPHYNIPLLPIAARKRVTTIHDVYHLAYQHTLTLPQKAYANFFIRAAVK
LSNKLITVSEFSKSEIVRYTQASSESIFTIHNGVDTEKFSEKRQISHKLLNKQASKYILY
VGNVKPHKNLVTLLKAYSQIQQYDVSCKLLIVGKKEGFITSDNQIATLLKQNTILNEGVV
FTGFVEEDLLPQLYQNAVALVVPSVYEGFGLPSLEAMASGCPVIASTAASIPEICGDAAM
YFDPLDHESLADRLKCVLTSIAEREILVTKGYSRIKSYSWQKSAEKHTATFKQVLEANL