Protein Info for CA264_04345 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: CAAX protease family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 311 transmembrane" amino acids 18 to 36 (19 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 88 to 108 (21 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details amino acids 168 to 184 (17 residues), see Phobius details amino acids 215 to 220 (6 residues), see Phobius details amino acids 225 to 227 (3 residues), see Phobius details amino acids 230 to 254 (25 residues), see Phobius details amino acids 260 to 280 (21 residues), see Phobius details amino acids 286 to 307 (22 residues), see Phobius details PF02517: Rce1-like" amino acids 217 to 293 (77 residues), 29.8 bits, see alignment E=3.1e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPF4 at UniProt or InterPro

Protein Sequence (311 amino acids)

>CA264_04345 CAAX protease family protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKQIAYYLKTYYREEFKWSFFLALVAFLGLCLYLNYKYDFENRYLDSFLYTSEHIPLMIG
FYAFAYVSAILLYAFFYRRTDFLRNPAFWSVSILALVIQGVNSSFYYLNPVYKQLFDSNT
YYFVRKCSNNIISELIYFLPLVVFWFMNDRHRQPLYGFSKGKLDLKPYFTLLLFMLPLLL
WASFQDDFLRSYPSYHPRRDTSDAFLSHFWTYEVFYGLDFIGTEFFYRGFMVMVLARYLG
AGAIMPMVAVYTFMHFGKPMGEAIGSFFGGAILGILAYYSRSIYGGIIVHLGVAYLMELT
AFLQHLFRKGL