Protein Info for CA264_04130 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 47 to 66 (20 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 117 to 137 (21 residues), see Phobius details amino acids 158 to 176 (19 residues), see Phobius details amino acids 192 to 213 (22 residues), see Phobius details amino acids 225 to 250 (26 residues), see Phobius details amino acids 256 to 282 (27 residues), see Phobius details TIGR02587: putative integral membrane protein TIGR02587" amino acids 13 to 283 (271 residues), 207.9 bits, see alignment E=9.8e-66 PF09622: DUF2391" amino acids 17 to 283 (267 residues), 267.7 bits, see alignment E=5.7e-84

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YP92 at UniProt or InterPro

Protein Sequence (284 amino acids)

>CA264_04130 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MSETENGRRVSQSLKEYARGIAGGLLFSFPLLYTMEVWWAGFIAEPLDLLVLMVVTYLLL
LGYNRFAGMHPDASWQNVFIDSVEEMGIGLLISFGVLLMLNRIELAHMSMDEIMGKVVIE
AMAVSIGVSIGTAQLGASQEVKKDDRKARQENNRNSKVALSVLGLCGALVVGGNVAPTEE
ILMLGVEAQPGHLLMMAIFSLLQSVVVVFFSNFRGTASMSPNGLLFNMAFDTCMSYLIAL
AVSAFVLWFFGRFDGVSFWVGFAQVIVLGVLASLGASAGRLLIK