Protein Info for CA264_04100 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: twin-arginine translocase TatA/TatE family subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 70 transmembrane" amino acids 6 to 28 (23 residues), see Phobius details TIGR01411: twin arginine-targeting protein translocase, TatA/E family" amino acids 11 to 54 (44 residues), 62 bits, see alignment E=1.5e-21 PF02416: TatA_B_E" amino acids 12 to 64 (53 residues), 66.3 bits, see alignment E=5.6e-23

Best Hits

Swiss-Prot: 57% identical to TATA_CHLPB: Sec-independent protein translocase protein TatA (tatA) from Chlorobium phaeobacteroides (strain BS1)

KEGG orthology group: K03116, sec-independent protein translocase protein TatA (inferred from 61% identity to sli:Slin_4498)

Predicted SEED Role

"Twin-arginine translocation protein TatA" in subsystem Cluster-based Subsystem Grouping Hypotheticals - perhaps Proteosome Related or Twin-arginine translocation system

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YY25 at UniProt or InterPro

Protein Sequence (70 amino acids)

>CA264_04100 twin-arginine translocase TatA/TatE family subunit (Pontibacter actiniarum KMM 6156, DSM 19842)
MEANTILLFLGLGGMELFLIIVAILLLFGAKKIPELARGLGRGIREFKDATTEVARDLED
SEKEKQHPKP