Protein Info for CA264_04030 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: multiple antibiotic resistance (MarC)-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 205 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 36 to 57 (22 residues), see Phobius details amino acids 69 to 87 (19 residues), see Phobius details amino acids 107 to 124 (18 residues), see Phobius details amino acids 130 to 152 (23 residues), see Phobius details amino acids 173 to 198 (26 residues), see Phobius details PF01914: MarC" amino acids 2 to 197 (196 residues), 67.6 bits, see alignment E=5.4e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YPD0 at UniProt or InterPro

Protein Sequence (205 amino acids)

>CA264_04030 multiple antibiotic resistance (MarC)-like protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MIAAIFSFLVMLNPFALFLYLKPVMNDLSDADFRSVFLKASMISLSIFLVFLLFGDVVFQ
KVFRINFESFRIFGGIVLFSLAYIFIVQGKKAFIQIKGDLHDLASEIAMPFMVGAGTISL
TILMAEQLVLWQGVVSLFLIMLVNYGVIMGLKQIRRNTRSRKVQVAFDKNMELLLRINGF
FVGAIGIDMVVTGISNLITTTAAQV