Protein Info for CA264_03035 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: T9SS C-terminal target domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1181 signal peptide" amino acids 1 to 49 (49 residues), see Phobius details PF07995: GSDH" amino acids 65 to 356 (292 residues), 91.8 bits, see alignment E=2.1e-29 PF18911: PKD_4" amino acids 560 to 647 (88 residues), 65.2 bits, see alignment 1.9e-21 PF00801: PKD" amino acids 570 to 641 (72 residues), 51 bits, see alignment 4.7e-17 PF22352: K319L-like_PKD" amino acids 579 to 647 (69 residues), 31.6 bits, see alignment 5.3e-11 PF17957: Big_7" amino acids 762 to 828 (67 residues), 46.7 bits, see alignment 1.7e-15 PF07953: Toxin_R_bind_N" amino acids 903 to 1062 (160 residues), 25.9 bits, see alignment E=3.2e-09 PF13385: Laminin_G_3" amino acids 910 to 1069 (160 residues), 72.8 bits, see alignment E=1.4e-23 TIGR04183: Por secretion system C-terminal sorting domain" amino acids 1099 to 1179 (81 residues), 26.8 bits, see alignment 2e-10 PF18962: Por_Secre_tail" amino acids 1099 to 1179 (81 residues), 29.1 bits, see alignment 3.7e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YNS0 at UniProt or InterPro

Protein Sequence (1181 amino acids)

>CA264_03035 T9SS C-terminal target domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKKLYKARGTNPLLLKYRHAYPNSCNLIFTILLTCVLSLGFSTPRALAQPTGFVEEQVGE
DWDAAVGMAFSDDGDRMYVWEKAGKVWIVEDGEKLEEPLLDISEEVGNWGDHGLLGFALD
PNFKSNRYIYLLYVVDRHHLLHYGTGSYNPNSNEYNNATIGRVTRYQVREDGLTTDMGSR
KVLLGESVSTGIPIMYVSHGVGSLVFGEDGSLLVSAGDGATANGQDTGWKEGVPTDNFVE
QALQDGILTQVNNVGAFRAQQVNSLNGKIMRIDPATGNGLPSNPFYNSANPRAAESRVWE
LGLRNPFRFTIRPGTGGGDNPGDLYIGDVGWQNWEEINVATEGGLNFGWPLYEGLEKQTN
YYDGTPLLTPNIANPLYGQANCEKETYMFLELIAQPKASGRPYFGHYCDWNTPIPDNVHT
FVHARPAIDWANAAITDKETPVAVTRTGTFNGEDAAVVNVGEPGSPVTGEPFYGSSSTGG
IWYTGSNMPAEYQNSYFFGDYGAGWIKVLKFDENNKPTAIQNFIDEGATVTAFSMNPATE
ELYYINYGSQIMKVSYYDGNTPPKAVAEADKLYGASPLTVNFTGSNSTDPEGQNLTYSWN
FGDGSAAVTEANPSHTFTAEEAKTFTVTLTVTDSEGLSSRNKLEITVNNTPPVVNIVSPA
ENVQYPMNQLSTYDLRAEVTDEEDADEALAYEWQVALHHNTHSHPEPVDTKHETSATVAA
VGCDGDTYFYRFSLKVTDTGGLSSSDYVDVYPDCSGGIVSAISLASPADGESFGVGDPIE
LSSDFADASRDWQMVEYFEGSNLIATVDASPFSYTWTNATEGTYTITAKATDTDGHSVTS
EAIMVKVGDGGVANLSDCLPGLIHYFEMDETEEGAYTDIATSAKAVCQTCPEPVSDGFFE
GAQRFNGTDSGIDYNQVSTFNWPANGSFSIGFWMRSSATDLGNMVIVGRDATDTDSGVHW
WIGVDKSGHAAFALKDAAHAGVEFGGTGPQINDGNWHYIMAMRDGESNMNRLYVDGEMLH
EQQVQYANDFVDDAAVNIGYLDRSPYFHYAGDVDEVKVYSRAITAEEVATNFNGGSGTYC
GQAPLGITDNETFTGTFEVFPNPTPGQQLNIFASELLPGEEADITLIDITGKTVLKQKVT
ASPEGVIRVTVTPNSELSTGLYNLLLFSKERKLSRKVMVAR