Protein Info for CA264_02515 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: nitrite reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 697 PF03460: NIR_SIR_ferr" amino acids 47 to 112 (66 residues), 70.8 bits, see alignment E=6.6e-24 amino acids 321 to 385 (65 residues), 42.1 bits, see alignment E=6e-15 PF01077: NIR_SIR" amino acids 122 to 274 (153 residues), 125.1 bits, see alignment E=1.8e-40 amino acids 394 to 540 (147 residues), 44.1 bits, see alignment E=1.5e-15

Best Hits

KEGG orthology group: K00381, sulfite reductase (NADPH) hemoprotein beta-component [EC: 1.8.1.2] (inferred from 64% identity to cpi:Cpin_6617)

Predicted SEED Role

"Ferredoxin--sulfite reductase (EC 1.8.7.1)" (EC 1.8.7.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.1.2 or 1.8.7.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YNE1 at UniProt or InterPro

Protein Sequence (697 amino acids)

>CA264_02515 nitrite reductase (Pontibacter actiniarum KMM 6156, DSM 19842)
MQSFRTEIENPIVEKDIIELEKKIRLYREGKLQEDKFKSLRLARGVYGQRQLGVQMVRIK
LPFGKLTTQQLTRIADISDEYSTGNLHLTTRQDIQIHFVSLDRTPVLWAKLEQDDITLRE
ACGNTVRNVTASPEAGIDPNEPFDVSPYADATFRYFLRNPICQDMGRKFKMSFSSSDSDT
AMSYMHDLGFIPKLKDGERGFKVMIGGGLGAQPALAHTAFEFLPENKVIPLIEGVLRIFD
RYGERNNRNKARFKYLIAKLGLDEVMRLVNEEYKALKSHVYEIDKSIEFNPAPPAAKEIP
DFVVEDTDKYNKWLKTNVFSQKQEGFYGIYIKVQIGDISSTTARKLVPLVREFAADEIRV
TQGQNLLLKYVRAEALPYFFAQLDELGLAEPGFNSVADITTCPGTDTCNLGISNSTNITK
VLEQVIVQEYPEMLFNTDIKIKISGCMNSCGQHGMANLGFHGSSLKSGKSVVPALQVLLG
GGTVNNGEGRIAQKLLKVPSKRGPEVLRYVLNDYQAKKQEGEHFNAYYDRNGKDYFYQLL
KPLTDLTTLTPEDFIDWGHQDDFQPAIGVGECAGVMIDLVATLLYEADEKLEWAGEAMEG
KRFADAIYYGYAAFISTAKALLLDKNVSTNTQNSIMEEFDKNFVETGIFSFGADFKSKVL
QINQNQPSEAFAKDYLNQALLFLQEATRYRQEKVVNV