Protein Info for CA264_02505 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 221 transmembrane" amino acids 15 to 37 (23 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 118 to 142 (25 residues), see Phobius details amino acids 163 to 203 (41 residues), see Phobius details

Best Hits

Swiss-Prot: 35% identical to YCZE_BACSU: Uncharacterized membrane protein YczE (yczE) from Bacillus subtilis (strain 168)

KEGG orthology group: K07149, (no description) (inferred from 68% identity to btl:BALH_3373)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YNK2 at UniProt or InterPro

Protein Sequence (221 amino acids)

>CA264_02505 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MQLNIFKGDTTRNWLIRYAFFFMGLVCFGLGIAISVKVKYLGLHPWDVLNVAFSQRFGFS
IGTWSVFIGLALILVSLFISRKYINIGTFLNALLIGPILDFFLWLDVLPDATHTGLDYLL
LLLGILIVGIGGGLYVAGGIGAGPRDGFMLTISDRTGFSVSKARIVVECVVLVIGYLLGG
PVFIVTFFYTFILSPIFQVSLKLFARLRDMLCEPKPAKARV