Protein Info for CA264_02330 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 401 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF07012: Curlin_rpt" amino acids 52 to 83 (32 residues), 29.1 bits, see alignment (E = 3.7e-11) amino acids 69 to 94 (26 residues), 22.2 bits, see alignment (E = 5.6e-09) amino acids 99 to 140 (42 residues), 21.2 bits, see alignment 1.2e-08 amino acids 141 to 163 (23 residues), 26.1 bits, see alignment (E = 3.4e-10) amino acids 167 to 198 (32 residues), 34.3 bits, see alignment (E = 8.9e-13) amino acids 236 to 267 (32 residues), 23 bits, see alignment (E = 3.2e-09) amino acids 302 to 332 (31 residues), 22.7 bits, see alignment (E = 3.9e-09) amino acids 327 to 353 (27 residues), 21.1 bits, see alignment (E = 1.2e-08) amino acids 349 to 380 (32 residues), 27.3 bits, see alignment (E = 1.4e-10)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YND9 at UniProt or InterPro

Protein Sequence (401 amino acids)

>CA264_02330 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MKKTIFYAAAVSAMMLTAGSAFAQSGAGNTSSSLQEGTMNSSSITQILGTMNTAGTIQRG
DGNSAMIMQQEGLENEAYIEQVGLSNGAEVTQVGGFSHDASIDQDGDENTAGIMQDMGWD
NEGAIDQDGMLNDADIIQEGGEDNDADIDQDGDMNEAYLIQSGGLYNYAEIDQDGDLNVA
YIGQFGGMYNDAVIDQDGDLNYAGILQDNGESNVAVIDQDGDMHWAEISQVGGVGNDASV
EQNGMDNYADVVQFEGSGNASMVYQDGEANEAFVIQTGGAGNSAMIEQMGVANLAAVEQQ
GGMDNSAAVYQSGAGNEAAVIQYEVGENTAYISQEGEANLAGVSQAGLANEAAVMQMGTL
HTASVVQEGTMNMATVNQMGGAGNMANVGQSGTGNVSVINQ