Protein Info for CA264_02260 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 798 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 287 to 308 (22 residues), see Phobius details amino acids 335 to 361 (27 residues), see Phobius details amino acids 382 to 405 (24 residues), see Phobius details amino acids 429 to 451 (23 residues), see Phobius details amino acids 675 to 698 (24 residues), see Phobius details amino acids 719 to 743 (25 residues), see Phobius details amino acids 759 to 781 (23 residues), see Phobius details PF12704: MacB_PCD" amino acids 20 to 240 (221 residues), 101.5 bits, see alignment E=8.2e-33 amino acids 446 to 601 (156 residues), 29.4 bits, see alignment E=9.3e-11 PF02687: FtsX" amino acids 293 to 409 (117 residues), 60.4 bits, see alignment E=1.7e-20 amino acids 679 to 787 (109 residues), 43.9 bits, see alignment E=2.2e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YN84 at UniProt or InterPro

Protein Sequence (798 amino acids)

>CA264_02260 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MLQNYFKIAVRNLFRNKVYSAINIVGLAIGVASCVLIYLYVQDELSYEKHFSKADRIVRL
VGDIKSDSGHEQFALSPAALAPALTKDFPDVEHITQLARAGKQTVWYREKSFNEDDLLYA
DSAFFQVFDYPLLAGSTATALSGPNKVVLSEEMAKRYFSSPDEAVGEVLTFSNEPYQVTG
VFRDPGHSHITANAFISRSTLDARLSEDLRTNQWLAMNRYTYVLLRGPEEFAQFQDKMDA
FSERHVTPWIKENDLSGTMRFVVQPLKDIHFDTVYVSSITPAGNISYVYIFAAVAVFLLL
IACINYMNLATARSAKRAKEVGLRKVVGAYRSQIVFQFLGESLLITLIAVVLALALVQVM
LPTFNSLTDKSFGSDFFMQWEFLAIMLAIVTFVGVVAGSYPAFFLSHFKPADVLKSDKAP
KGGSATLRRALVVLQFSISLIMIIGTIVVMSQMHFLKNKDLGFTKDQVMVIDIPAGDSTL
VKGLPRIKRELLSNPNVELVSNTNDIPAERVSKLLTLVEKDGQLVERTMNVMFADYDFID
LMGVEMSRGRNYSPVLKTDEKEGIILNEAAVKMMGWQEPLGKRFQIFDMDAKVIGVTKDF
HITSLHTNVEPLALVLAPESDGYLMARIKGQDLASTVGFIESAWQLYDPKHPMDYFFMDE
HFDQQYRAEEKMLTVFGYFAGLTILIACLGLFGLASFTAEQRTKEIGIRKVLGSSTSSIV
ILLSRDFALLVVVAILLASPVAWYGMHHWLQDFAYRIDLSWWIFAAAGFTAMLIALLTVS
FQAFKAAMLDPVNAIRTQ