Protein Info for CA264_01885 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: peptidase M3

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 731 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF19310: TOP_N" amino acids 84 to 197 (114 residues), 43.4 bits, see alignment E=2.8e-15 PF01432: Peptidase_M3" amino acids 271 to 720 (450 residues), 335.5 bits, see alignment E=7.6e-104

Best Hits

KEGG orthology group: None (inferred from 77% identity to lan:Lacal_1935)

Predicted SEED Role

"Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)" in subsystem Protein degradation (EC 3.4.15.5)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.15.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YN31 at UniProt or InterPro

Protein Sequence (731 amino acids)

>CA264_01885 peptidase M3 (Pontibacter actiniarum KMM 6156, DSM 19842)
MGNQMLYAGKKSSVLVMLALLGCTSTQQGQQSQQTPTAMEQQKHTDNPLLAKWTGPYGGV
PAFDKMDLADLKPAIEQGMAIQLAEIEAIANNPAPATFANTIEPLEKAGEELNRAFTYYS
IWSSNKSSPEFRAIQAELAPKISEFNSKISQNEKLFQRIKTVYDNSQKKALPADQQRVVQ
LVYKGFAMEGANLDAAAKARYAAINKELSSLYTAFSNNILADEENYVTYLTKDQLSGLPE
SFVKAAAKAAADRGQEGKYAVTNTRSSMDQFLTYSDERALREKVWNTYYSRGDNGDASDN
NENIQKILQLRNERVKLMGYDNYADWRLQNRMAKTPERAMDLMNAVWPAAIARVKEEVAD
MQAVADASGKSITIKPWDYRYYAEKVRQQKYDLDSDEVKQYLELNNLTQALFFTAGELFN
YKFTPVAEGAVPVFHEDVKVWEVTDKTTGEHIGLWYLDPFARQGKRSGAWASPYRSHTTF
NGKQTVLASNNSNFIKPAPGEPVLVSWDDATTFFHEFGHALHFLSSNVKYPTLNGGVRDY
TEFQSQLLERWLSTDKVINQFLKHHKTGEVMPAELVAKIKKASTFNQGFATTEYLASALM
DMKYHLADPASIDPDAFERETLAAMNMPSELVMRHRSPHFGHVFSGEGYATAYYGYMWAD
VLTADAAEAFEEAPGGFYDKEVAAKLRKYLFAPRNSMDPAEAYRKFRGRDAKIDALMRDR
GFPVTEPQSKK