Protein Info for CA264_01720 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: NADH-ubiquinone/plastoquinone oxidoreductase chain 6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00499: Oxidored_q3
  • amino acids 18 to 168 (151 residues), 117 bits, E=2.9e-38

Best Hits

KEGG orthology group: K00339, NADH dehydrogenase I subunit J [EC: 1.6.5.3] (inferred from 41% identity to psn:Pedsa_1947)

Predicted SEED Role

"NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)" in subsystem Respiratory Complex I (EC 1.6.5.3)

MetaCyc Pathways

• aerobic respiration I (cytochrome c) (3/4 steps found)
• aerobic respiration III (alternative oxidase pathway) (2/3 steps found)
• NADH to cytochrome bd oxidase electron transfer I (1/2 steps found)
• NADH to cytochrome bo oxidase electron transfer I (1/2 steps found)
• Fe(II) oxidation (2/6 steps found)
• NAD(P)/NADPH interconversion (2/6 steps found)

KEGG Metabolic Maps

• Oxidative phosphorylation

Isozymes

Compare fitness of predicted isozymes for: 1.6.5.3

Use Curated BLAST to search for 1.6.5.3

Sequence Analysis Tools

See A0A1X9YN30 at UniProt or InterPro

Protein Sequence (175 amino acids)

>CA264_01720 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Pontibacter actiniarum KMM 6156, DSM 19842)
MDNINMLFYIFAILAILSAAYMVLTRNLLYAGFSLLITLLSLAGIYVLLFADFVAVTQLM
VYVGGVLVLILFGIMLSSRVQDKSVLSESVNKVWGTTVAGLILVGMCYTILKSNISALPW
LQTTEVNVLGLQKSTVQSIGIKLMTDVVVPFELASLLLLIALIGAAYIATDNQKA