Protein Info for CA264_01530 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 347 transmembrane" amino acids 25 to 44 (20 residues), see Phobius details amino acids 59 to 75 (17 residues), see Phobius details amino acids 88 to 108 (21 residues), see Phobius details amino acids 120 to 144 (25 residues), see Phobius details amino acids 151 to 171 (21 residues), see Phobius details amino acids 190 to 209 (20 residues), see Phobius details amino acids 221 to 240 (20 residues), see Phobius details amino acids 252 to 273 (22 residues), see Phobius details amino acids 305 to 326 (22 residues), see Phobius details PF13593: SBF_like" amino acids 28 to 337 (310 residues), 340.8 bits, see alignment E=8.2e-106 PF01758: SBF" amino acids 64 to 236 (173 residues), 38 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: K14347, solute carrier family 10 (sodium/bile acid cotransporter), member 7 (inferred from 61% identity to sli:Slin_1899)

Predicted SEED Role

"Sodium/bile acid symporter family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YMV9 at UniProt or InterPro

Protein Sequence (347 amino acids)

>CA264_01530 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MEQKEKIAPEPVGLVPRIGKLAARAGLDWFLLALISMIFLAYLWPQVGVDREPVSLGDVA
NYGVSVIFFFYGLRLSPDKLRAGLSNWRLHTVVQLSTFVLFPLLILPLHSLFEGTPQELL
WLGVFYLAALPSTVSSSVVMVSIAGGNIPGAIFNASISSLMGIFLTPLWMGLFLTSSTEG
FDIWSVMGKLVLQVLLPVVLGIVLHRYWGAFAERHKGRLRVFDQVIILLIVYTSFCESFA
RKMFSGYSVGDILILGGAMIGLFFLVYSIIYGITKLLGFNRENQITAIFCGSKKSLVHGT
VMSKVLFPGANMVGIILLPIMMYHALQLLAASIIAQAEARKAAADAG