Protein Info for CA264_01475 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 668 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 56 to 77 (22 residues), see Phobius details amino acids 646 to 665 (20 residues), see Phobius details TIGR02226: N-terminal double-transmembrane domain" amino acids 1 to 80 (80 residues), 57.7 bits, see alignment E=5.4e-20 PF07584: BatA" amino acids 1 to 76 (76 residues), 62.5 bits, see alignment E=2.1e-21

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YMU8 at UniProt or InterPro

Protein Sequence (668 amino acids)

>CA264_01475 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MTFLYPSFLFALAAVAVPIILHLVQLRRAKRVVFSNVKFIQVSKDLTASQRNLKELLILL
CRILFIVFLVLAFAQPFLPAADAAAGARDAEVSVAVDNSYSMENLHEEEELTLLHVATDR
AKAIADLFPPSSAFKLFSTDKVNHGAAVQQSEVPAYLDRLNFSAKSFSPAVAVGEKPAHT
FILSDFQKETFSPAALDAFDTLTQVHLVPLAAANTVNITVDSVYLEDEFIRPGTESVLHV
LLANTGSEPVEDVPVKLFINDQQVSALSIDLPAQQSTEAVMAFRAAGSGVQKAYLQVEDY
PVEFDNTYYFVLSPSSPISVTEITDQANTSLQRLYRNEPFFDYRAYSSNNVDYAALAASD
VVLLNGIETLSPGLAATLANYVKAGGTLAVLPPAGQEGGAYASLFQNLGLTASFTGSSAT
APKTSLAPPDPNSPFFRSIFSDFDPKMQMPSAARSIAWSRASEDVLKYRGGAPFFSRFDR
GSGAVYLMAAPLDEELSSLPNHALFVPLMYRLAISSYKQEQQLAYALGGGTVQVPAVSLS
KKEGVYKLQQDTVAFIPEQQVRGGKLYFNVPADMGQAGFSTLQLQDSTIATLAFNYGKKE
SQLEQYTPEELRALVGEERPNVHVYAYGDAFSVKGEFEKRYFGVKLWKYCLILCLFFLMA
EIALIRFL