Protein Info for CA264_01415 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: trigger factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 PF05697: Trigger_N" amino acids 1 to 146 (146 residues), 115.8 bits, see alignment E=2.1e-37 TIGR00115: trigger factor" amino acids 12 to 418 (407 residues), 208.9 bits, see alignment E=5.8e-66 PF05698: Trigger_C" amino acids 269 to 396 (128 residues), 29.6 bits, see alignment E=6.6e-11

Best Hits

KEGG orthology group: K03545, trigger factor (inferred from 46% identity to mtt:Ftrac_1137)

Predicted SEED Role

"Cell division trigger factor (EC 5.2.1.8)" in subsystem Bacterial Cell Division (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YMZ1 at UniProt or InterPro

Protein Sequence (440 amino acids)

>CA264_01415 trigger factor (Pontibacter actiniarum KMM 6156, DSM 19842)
MNITLNQTDSTNAQLKVVLEEADYAPKVDQQVKEYSKKAQIKGFRPGKVPAGLVKKMYGK
SILVEQINKTLQEEISKYLRENDVKLLGEPLPEPDQEQIDWDNQKTFEFNYAVGLLPDFN
LPLDKSVEGYKVELDQKTIDEAYENLKRQFGKTANPETSEQGDFISGELKQVDGEFQSKT
LIPTNRVVEGQDKFTGVKADDVIRFDIRKTFGDDNAALAHVTGLSKEAVADLNGEFEFTV
EKINRTEPAELNQELFDKLFGKDEVKTEEEFDAKIRETIMENYEREADNLIYREIIDTLV
DNVEVELPTAFFKRWIQVTNEGKLTEEQIEENFDKYVRELKWSMIKNKVVEENELKVTNE
EVVEATKEKMLAQFNMPEVPEELKESMNNYAQQYLQQDNGRNYINEYEQLLAEKVLAKLK
EQMTVVEKTISSEDFRNMSL