Protein Info for CA264_01250 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: amidohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1099 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07676: PD40" amino acids 93 to 120 (28 residues), 26.2 bits, see alignment (E = 1.2e-09) amino acids 189 to 206 (18 residues), 14.3 bits, see alignment (E = 6.7e-06) amino acids 401 to 425 (25 residues), 17.9 bits, see alignment (E = 4.7e-07) amino acids 449 to 476 (28 residues), 21.5 bits, see alignment (E = 3.4e-08) PF01979: Amidohydro_1" amino acids 713 to 1047 (335 residues), 77.3 bits, see alignment E=2.7e-25 PF07969: Amidohydro_3" amino acids 985 to 1046 (62 residues), 36.9 bits, see alignment 6.4e-13

Best Hits

KEGG orthology group: None (inferred from 62% identity to fbc:FB2170_14083)

Predicted SEED Role

"tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins" in subsystem Ton and Tol transport systems

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YMS1 at UniProt or InterPro

Protein Sequence (1099 amino acids)

>CA264_01250 amidohydrolase (Pontibacter actiniarum KMM 6156, DSM 19842)
MNKRTYLSIFLAAALALPYSAAQAQDKKEDAKWKVDAAHGPQKEVSITTNEGTWMSVDVS
PDGKEIVFDMLGDIYIMPFAGGKAKLLRTGRPYEVQPRFSPNGQYISFTSDAGGGDNIWI
MKRDGSDAKQITNESFRLLNNAVWTPDGEYIVARKHFTNTRSLGAGEMWMYHRTGGTGVQ
LTKRKNDQQDAGEPFASPDGKYVYYSEDMSGGSTFEYNKDPNGQIYVIRRVDRYTGEIEN
VITGNGGAVRPVLSRDGKYMAFVRRVRTKSVLFVHDLQTGEQWPIYDKLNHDQQEAWAIF
GVYPYFSWTPDNKHLVFWADGKINKIDVATQKVSNIPFEATATHYVADAVRHDHSKDGGV
SPKQFTAKAIRHAVTSPDGKTLVFNAAGHIYKKELPNGKPERITKSQDFEFYPAFSSDGK
HLVYSTWSDDSYGALYKLDIRRKNAKPARLTADKGFYTEPTFSPNGKYIVYSKDGGNNHM
GYAHGKQQGIYYMPADGGKATLVQERGSSPLFNATSDRVFFTGSEGDKYAFKSVDLNGKN
EQTHYTSKYTDQFYPSPDNKWIAFVELFNGYVAPFTANGSGLDLSADTKAVPVARFTRDA
GTSIHWSADSKKVNWVLGDEYFSNELKERFAFVPGAPDQLPTIDTTGTKIGLELQTDVPE
GKVAFTNARIITMKGDEVIEGGTIIVDGNRIVAVGKDVDVPKDAKVIDANGKTIMPGIVD
VHAHLGTFRLGMSPQKQWSYYANLAYGVTTTHDPSSTTEMVFSQSEAVKSGAMVGPRIYS
TGTILYGADGNFKAVINSLDDARSHLRRLKAVGGFSVKSYNQPRREQRQQVIEAARELDM
SVYPEGGSTFFHNMSMVLDGHTGIEHNIPVAPVYKDVTELWKATKVGYTPTLIVNYGGNS
GEYYWYQKTNVWDKERLLKFTPRSIIDGRSRRVTLVPDEEYENGHIATSKAAKALADSGV
KVNLGAHGQLQGLGAHWELWMLQQGGMTNLEALQSATINGAAYLGMDKDLGSLEVGKLAD
LIVLDKNPLENIQNSEHVKYTMVNGRLYDAATMAEVGNYDKKPSKFWWENDKYATAFDWH
EGTDTRFEGIAGEHCVCRH