Protein Info for CA264_00860 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: CPBP family intramembrane metalloprotease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 290 transmembrane" amino acids 25 to 51 (27 residues), see Phobius details amino acids 58 to 76 (19 residues), see Phobius details amino acids 97 to 119 (23 residues), see Phobius details amino acids 135 to 153 (19 residues), see Phobius details amino acids 181 to 185 (5 residues), see Phobius details amino acids 189 to 208 (20 residues), see Phobius details amino acids 213 to 233 (21 residues), see Phobius details amino acids 253 to 272 (20 residues), see Phobius details PF02517: Rce1-like" amino acids 140 to 226 (87 residues), 83 bits, see alignment E=7.5e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YMM6 at UniProt or InterPro

Protein Sequence (290 amino acids)

>CA264_00860 CPBP family intramembrane metalloprotease (Pontibacter actiniarum KMM 6156, DSM 19842)
MALTSTSVEVLPASTPPETTYSLAGAWGFVGVLLLTFFGGSVVSLGLALALGHPTSESFL
TFVGYTIPFLLYAWYLKRKGLLSELLAAVSRWQPGPLLLYPLLVLLVPSIQVVIEPVTSL
IPMPESVKEMFLSRLGGGDLFTVLTVVVAAPVLEEVVLRGQLLRSLLHKYSAAKAITWSS
IMFAVIHMNPWQGVGAFVLGLFLGWIYYRTRSLWACIFFHFVNNLFSTVMIQLMPEGADK
FATLYEQVGDATAYTLIYGAAVVVLLAVIVCMSRTFKGLGEEAELVKESC