Protein Info for CA264_00205 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 190 to 210 (21 residues), see Phobius details PF05227: CHASE3" amino acids 36 to 178 (143 residues), 97.7 bits, see alignment E=1.5e-31 PF00672: HAMP" amino acids 209 to 258 (50 residues), 41 bits, see alignment 4.7e-14 PF00512: HisKA" amino acids 272 to 337 (66 residues), 38.9 bits, see alignment E=1.9e-13 PF02518: HATPase_c" amino acids 380 to 488 (109 residues), 96.6 bits, see alignment E=3.2e-31 PF14501: HATPase_c_5" amino acids 381 to 474 (94 residues), 26.2 bits, see alignment E=1.5e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YM86 at UniProt or InterPro

Protein Sequence (493 amino acids)

>CA264_00205 histidine kinase (Pontibacter actiniarum KMM 6156, DSM 19842)
MKLSVKLFAGFVLISVLFTAVAIVNFRLSEAVIENTQWVSRSQIMVRNSAALQRNIIDME
TGLRGYLLNGNKTFLQPYVQAKDQLPGLMQETKTFVSASPEQIKKITEIQSLKNNWLNSY
AEPLIQLKSTGDTLVNNRAFDAKLDSLVLGEKIIMDSIRIAFRELNAYEYKVREERRERL
NRSINNTRQLSTILTILSVMLGLCWAYYITRLISNRIIKMVTLAEQVSRGDYKTRIVDTS
NDELSQLSHSLNRMSTTIDETFTELDLKNKELDQFAYVVSHDLKAPLRGIEVASRWVEED
MGSKLPPNVQEYLLMMRVRVHRMENLINGILVLARIGRTSQVEEDVDVNLLLVEVVDMLA
PPKNFTIDVQDGLPTLHTVRIQLQQVFSNLISNAIKYHDKDSGFITVNHHETEKFHVFSI
SDDGPGIDPAYHERIFVIFQTLQERDAVESTGVGLTIVKKIVEWQGGSISVSSEPGKGST
FTFTWPKDSGEVE