Protein Info for CA264_00160 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1013 transmembrane" amino acids 16 to 37 (22 residues), see Phobius details amino acids 91 to 111 (21 residues), see Phobius details amino acids 118 to 137 (20 residues), see Phobius details amino acids 148 to 168 (21 residues), see Phobius details amino acids 175 to 194 (20 residues), see Phobius details amino acids 208 to 228 (21 residues), see Phobius details amino acids 248 to 269 (22 residues), see Phobius details amino acids 281 to 298 (18 residues), see Phobius details amino acids 318 to 337 (20 residues), see Phobius details amino acids 349 to 369 (21 residues), see Phobius details amino acids 389 to 407 (19 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YM78 at UniProt or InterPro

Protein Sequence (1013 amino acids)

>CA264_00160 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MNKIKFWKSWDTHTKYPYLFLFLLSALALLLGVYHYFTGDNAVFAWDKITDLQVVPMPVH
EVTRLLEPFTLSADGYLISEQYDVAAPEVNTWVASVLLGMLAICVAFYTAAISTMRQLPY
FAGVLLLMLFLATFNFDLLEIFGGGASQTMLLLSIAMLAMGSYAFQAFWQNTNFGLRVLG
MLVIVGVLGMLLYAEAEFPAELVTLHLVNYSSIGLLVATVLFMLWVSYENVNALLWINTQ
AKTPERRFGMWQFILISLLYLLSLLLIYLRHVGVVRTDVSYINAYLILLLSTVAGFWGMR
QREKVYGGLFPFRPTGAVLYLVFATITFLSIGYAYATANDSLTTLFDDLVVYTHLAFGVG
FFLYVMINFGRLLEQRLQVYKVVYEPRSFSLFSFFIMSSVICVVMVMRTQYRVYFHAQAG
YYSYLGDLYRASGNDILAERFYEESDVYDNNNVKANYSLAAMYRQEQQRNNEILRLKDAL
EKRPNPKLYVRLANLYDEKQFFFEKLYVLQQGAEQFPESSEIYNNLALLYAQTSVQDSTE
YYFDLAQRFADNDDFVRSNRLAYYTRQAMLEPAKTVLEESLKGKYKTLRSNQAVLRQLLG
LDPQDKEDFMPDSLEAVEDFALFYNQTISRLNTDDTTRLQPISRYLKSPGNQIFYSDLYY
LRGLIHHYNGLPQEGRNALENLALQMEVQSGYYYNALGQWMLEEENYRAAAAYFKQAKDR
GYPQAYLSQGYALALAHQPEAAVAALEEVAYTENEAAVSVAQELAALLQKDVQAVQQSST
DKEKVQYLLTYLPKLAPEQVNALVEAVQEKELKRRALVARVDYLLGQKRWKAALDAITEA
SGQLKPEGELRSALNLQQLKLWLYTENYDVLLNRLDKLYLTDRDKRMGLYFKARIAEAKG
RMEEAASRYEQALKMLVYDEETVLAAAEFFNKYKPDEEAAYNILLSGVTYNPYAAQLYKA
YALESLDQGLYSYAEQASETLQGLLPASEYTTFIEKLAQKRQEVEARAENWQL