Protein Info for CA264_00100 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: acetate--CoA ligase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1285 transmembrane" amino acids 785 to 806 (22 residues), see Phobius details PF16177: ACAS_N" amino acids 11 to 64 (54 residues), 72.3 bits, see alignment (E = 3.4e-24) amino acids 665 to 720 (56 residues), 77.5 bits, see alignment (E = 8.1e-26) PF00501: AMP-binding" amino acids 72 to 452 (381 residues), 259.4 bits, see alignment E=7.6e-81 amino acids 722 to 1108 (387 residues), 304.9 bits, see alignment E=1.2e-94 PF13193: AMP-binding_C" amino acids 517 to 596 (80 residues), 91.3 bits, see alignment 9.3e-30 amino acids 1170 to 1248 (79 residues), 78.4 bits, see alignment 9.8e-26 TIGR02188: acetate--CoA ligase" amino acids 661 to 1282 (622 residues), 954.9 bits, see alignment E=1.8e-291

Best Hits

Predicted SEED Role

"Acetyl-coenzyme A synthetase (EC 6.2.1.1)" in subsystem Ketoisovalerate oxidoreductase or Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate (EC 6.2.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.2.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YM59 at UniProt or InterPro

Protein Sequence (1285 amino acids)

>CA264_00100 acetate--CoA ligase (Pontibacter actiniarum KMM 6156, DSM 19842)
METLSPTPNNYAEAYAQSIADPEAFWGEQAEQLAWYEKPQQVLTTDENGFYRWYKGGKLN
TAYLALDYHVENGRGDQTALIYDSPVTGTIKKYTYAELRDFVARFAGALQQLGVGKGDTV
VIYMPVIPEAMVAMLACARLGAVHSVVFGGFAPHELCVRIDDAKPKVVISASCGIEFDKV
IPYKPLLDKALNDSTHKPEHTIIFQRPQVQAAMQQGRDLDYVEVLEQAAPADCVPVDATD
PLYILYTSGTTGKPKGIVRDNGGHAVALKYSMKAVYDVDPGDVFWAASDVGWAVGHSYLV
YGPLIHGCTSILFEGKPVRTPDAGTFWRIIQQHEVKVLFTAPTAFRAIKKEDPDGLLKKK
YDTPSLKYLFLAGERCDVSTYYWAKNLLQVPVIDHWWQTESGWPMVANMAGLELQPAKPG
SAGKPVCGYEVHILNEEGQQLIPNQEGVVAVKLPLPPGCLPTLWEDDERFRKSYLERFPG
YYMTGDGGYIDEEGYVYIMGRIDDVINVSGHRLSTGEMEEMVSSHPAVAECAVIGIADDL
RGQRPVGLVVLKDGQTIGEQELEQELVALLRDKIGAVAYFKTVVLVQRLPKTRSGKILRR
ILRHIADGTPYAVPSTIDDPAILTEIHDHLKARRIGNAFINLKTKSNQELHLAMTNYQVS
TYDEYQDAYKRSTEDPEGFWADVADTFTWRKKWDKVLEWNFEEPSVKWFQGGKMNITENC
LDRHLKTRGNKLALIWEPNDPKERFVRLTYRELHEKVCQFANVLKKNGAKKGDRICIYMP
MVPELAIAVLACARIGAIHSVVFAGFSASAMADRINDAQCSMVLTSDGLNRGAKQIPVKR
VVDEALEDCTSVKKVIVVERLGWAVNMVEGRDVWYHDEVQTVGKDCPAEEMDAEDMLFIL
YTSGSTGKPKGVVHTCGGYMVYAQYSFCNVFQYQESDVYWCTADIGWITGHTYLVYGPLL
AGATTLMFEGVPTYPDMGRFWQVVDKFGVTIFYTAPTAIRALMGGDLDNVLSYSLDSLRV
LGSVGEPINEEAWHWYHIHVGKEDCPVVDTWWQTETGGIMISTLADVTPMKPSHAGLPLP
GIQPILVDSDGNEITENGVEGYLCVKFPWPSMIRTTYGDHERARLSYFSTYKGLYFTGDG
AKRDENGLYRIIGRVDDVINVSGHRFGTAEIEEAINHNEHVIESAVVGYPHDVKGQGIYA
FVILKDKPERDDWLRAEIIETVVEKIGKIAKPDKIQIVSGLPKTRSGKIMRRILRKVAEG
DTSNLGDTSTLLDPEVVEEIKNGAL